Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0958 |
Symbol | |
ID | 6177284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1048793 |
End bp | 1049413 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641680708 |
Product | oligoribonuclease |
Protein accession | YP_001807665 |
Protein GI | 172060013 |
COG category | [A] RNA processing and modification |
COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.8305 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGATA CCGCCGCTTC CGCCAGCCAG CCCGCGCTCG TGCGCAACGA GTTGAACCTC GTCTGGCTCG ACATGGAGAT GACGGGCCTC GACCCGGATA ACGACCGCAT CATCGAAATC GCGGTCGTCG TGACCAATTC CACCCTCGAC ATCGCGGTGG AAGGCCCCGT GTTCGCGATC CACCAGAGCG ACGAAACGCT CGCGAAGATG GACGACTGGA ACAAGTCGAC GCACGGCCGT TCGGGGCTGA TCGACCGCGT GCGCGCGTCG ACCGTGACCG AGGCGGACGC CGCCGCGCAG CTGCAGGCGT TCCTCGCGCA GTACGTGTCG CCCGGCAAGT CGCCGATGTG CGGCAACTCG ATCTGCCAGG ATCGCCGTTT CATGGCGCGC TGGATGCCGG AATTCGAGCG GTTCTTCCAC TACCGCAACC TGGACGTCAG CACGCTCAAG GAGCTGTGCC GCCGCTGGCA GCCCGCGATC TACAAGGGTT TTCAGAAGCG CGCGATGCAC ACGGCGCTCG CCGACATCCA CGAGTCGATC GACGAGCTGA AGTACTACCG CCAGCATTTC CTGATTCCGG CCGCGTCGGC GCCGGCAGGC GAGTCCGCGC CGGCCGCCTG A
|
Protein sequence | MTDTAASASQ PALVRNELNL VWLDMEMTGL DPDNDRIIEI AVVVTNSTLD IAVEGPVFAI HQSDETLAKM DDWNKSTHGR SGLIDRVRAS TVTEADAAAQ LQAFLAQYVS PGKSPMCGNS ICQDRRFMAR WMPEFERFFH YRNLDVSTLK ELCRRWQPAI YKGFQKRAMH TALADIHESI DELKYYRQHF LIPAASAPAG ESAPAA
|
| |