Gene BamMC406_0958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0958 
Symbol 
ID6177284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1048793 
End bp1049413 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content66% 
IMG OID641680708 
Productoligoribonuclease 
Protein accessionYP_001807665 
Protein GI172060013 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.8305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA CCGCCGCTTC CGCCAGCCAG CCCGCGCTCG TGCGCAACGA GTTGAACCTC 
GTCTGGCTCG ACATGGAGAT GACGGGCCTC GACCCGGATA ACGACCGCAT CATCGAAATC
GCGGTCGTCG TGACCAATTC CACCCTCGAC ATCGCGGTGG AAGGCCCCGT GTTCGCGATC
CACCAGAGCG ACGAAACGCT CGCGAAGATG GACGACTGGA ACAAGTCGAC GCACGGCCGT
TCGGGGCTGA TCGACCGCGT GCGCGCGTCG ACCGTGACCG AGGCGGACGC CGCCGCGCAG
CTGCAGGCGT TCCTCGCGCA GTACGTGTCG CCCGGCAAGT CGCCGATGTG CGGCAACTCG
ATCTGCCAGG ATCGCCGTTT CATGGCGCGC TGGATGCCGG AATTCGAGCG GTTCTTCCAC
TACCGCAACC TGGACGTCAG CACGCTCAAG GAGCTGTGCC GCCGCTGGCA GCCCGCGATC
TACAAGGGTT TTCAGAAGCG CGCGATGCAC ACGGCGCTCG CCGACATCCA CGAGTCGATC
GACGAGCTGA AGTACTACCG CCAGCATTTC CTGATTCCGG CCGCGTCGGC GCCGGCAGGC
GAGTCCGCGC CGGCCGCCTG A
 
Protein sequence
MTDTAASASQ PALVRNELNL VWLDMEMTGL DPDNDRIIEI AVVVTNSTLD IAVEGPVFAI 
HQSDETLAKM DDWNKSTHGR SGLIDRVRAS TVTEADAAAQ LQAFLAQYVS PGKSPMCGNS
ICQDRRFMAR WMPEFERFFH YRNLDVSTLK ELCRRWQPAI YKGFQKRAMH TALADIHESI
DELKYYRQHF LIPAASAPAG ESAPAA