| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0953 |
|---|
| Symbol | |
|---|
| ID | 6178715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 1044295 |
|---|
| End bp | 1044981 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641680703 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001807660 |
|---|
| Protein GI | 172060008 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0994513 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAATCGCC GCCCCATCGT TGATCCCGAA GTGCTGCCGG TCGAAGGCAC CGGCGCCGGC
CTGCCGTCCA TCGATGCACG CCTGCTGACG CCGCCCGGGC TGCGCGAACG CTTCGCGCGC
ACGCTCGAAT GGAACGTCGA GCCCGGCGAG GCTCGGCTGG TGGAAGGCGT CGATCCGCGC
AGCGCCGCCG TCCTCATCCC GCTCGTGGTG CGCGAGAGCG GTCTCACAGT GCTGCTGACC
CAGCGCGCCG ATCACCTGAA CGACCATGCT GGGCAGATCA GCTTCCCCGG CGGCCGTCGA
GAGTCGTACG ATCGCGATGC GACGGCGACC GCGTTGCGCG AGGCGAAGGA AGAAATCGGA
CTGACGGCCG AACGGGTGGA GATTCTCGGT GCGCTGCCCG ACTACCTGAC GGGTACCGGC
TTCTGCGTGA CGCCGATCGT CGGGCTCGTC CATCCGCCGT TCACCGTGCA GGCCGATGCG
TTCGAAGTCG CCGAGATTTT CGAGGTGCCG CTCGCGTTCC TGATGAGTCC CGCGAACCAC
CAGGTGCGCG TGTTCCGCTG GGAAGGCGGC GAGCGTCGTT TTTTTGCGAT GCCCTATCCG
AATGGAGAAT CGGCCGGGCA TTACTTCATC TGGGGCGCAA CTGCCGGCAT GTTGCGCAAT
CTGTACCGCT TCTTTGCAGC CGGATAA
|
|---|
| Protein sequence | MNRRPIVDPE VLPVEGTGAG LPSIDARLLT PPGLRERFAR TLEWNVEPGE ARLVEGVDPR
SAAVLIPLVV RESGLTVLLT QRADHLNDHA GQISFPGGRR ESYDRDATAT ALREAKEEIG
LTAERVEILG ALPDYLTGTG FCVTPIVGLV HPPFTVQADA FEVAEIFEVP LAFLMSPANH
QVRVFRWEGG ERRFFAMPYP NGESAGHYFI WGATAGMLRN LYRFFAAG
|
|---|
| |