Gene BamMC406_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0952 
SymbolrplS 
ID6176394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1043816 
End bp1044208 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content59% 
IMG OID641680702 
Product50S ribosomal protein L19 
Protein accessionYP_001807659 
Protein GI172060007 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0335] Ribosomal protein L19 
TIGRFAM ID[TIGR01024] ribosomal protein L19, bacterial type 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.381908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGA TTGCAAAACT TGAGCAGGAA GAGATCGAGC GCGCGCTCGC CGGCAAGACG 
ATCCCCGAAT TCGCCCCGGG CGACACGGTG ATCGTGAACG TGAACGTGGT TGAAGGTAAC
CGCAAGCGCG TTCAGGCTTA CGAAGGCGTC GTGATCGCGA TTCGCAACCG CGGCCTGAAC
TCGAACTTCA TCGTCCGCAA GATTTCGTCG GGCGAAGGCG TCGAGCGTAC GTTCCAGACC
TACTCGCCGC TGCTGGCGAG CATCGTCGTC AAGCGTCGCG GTGATGTGCG TCGTGCGAAG
CTGTACTACC TGCGCGAGCG TTCGGGCAAG TCGGCTCGAA TCAAGGAAAA GCTGGTGTCG
AAGGATCGCA CCGCAGCAGC TTCCCAAGAG TAA
 
Protein sequence
MNLIAKLEQE EIERALAGKT IPEFAPGDTV IVNVNVVEGN RKRVQAYEGV VIAIRNRGLN 
SNFIVRKISS GEGVERTFQT YSPLLASIVV KRRGDVRRAK LYYLRERSGK SARIKEKLVS
KDRTAAASQE