Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0951 |
Symbol | trmD |
ID | 6179033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1042888 |
End bp | 1043682 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641680701 |
Product | tRNA (guanine-N(1)-)-methyltransferase |
Protein accession | YP_001807658 |
Protein GI | 172060006 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGG TTACGGAGAG CGCGGTGCAG TTCGACGTCG TCACGCTCTT TCCCGAAATG TTCCGCGCGC TGACCGACTG GGGGATCACC AGCCGGGCCG TGAAGCAGGA GCGCTTCGGG CTGCGCACCT GGAACCCGCG TGATTTCACG ACGGACAACT ACCGCACGGT CGACGACCGT CCGTACGGTG GCGGTCCGGG CATGGTGATG CTGGCCAAGC CGCTCGAGGC CGCGATCAAC GCTGCGAAAG CAGCGCAGGC GGAGCTGGGC GTCGCGAGCA CGCGTGTGGT GATGATGTCG CCGCAAGGTG CGCCGTTCAC GCACGAACGT GCGGTGCGGA TGGCGCAGGA GCCTGGTGTC ATCGTGCTGT GCGGCCGCTA CGAGGCGATC GATCAGCGTC TGCTCGACCG TTGTGTAGAC GAGGAAATCA GCCTCGGCGA TTTCGTTCTG TCCGGTGGCG AACTGCCGGC GATGGCGATG ATGGATGCCG TCGTGCGCCT GCTGCCCGGC GTGCTGAACG ATGCGCAGTC AGCCGTGCAG GACAGCTTCG TCGACGGGCT GCTCGATTGT CCGCATTACA CGCGCCCCGA GGAATACGAG GGAATGCGCG TGCCGGACGT GCTGCTCGGC GGGCATCATG CCGAGATCGA GCGGTGGCGC CGCCAGGAAG CATTGAAGAA TACGTTGCGG AAGCGGCCGG ATCTGATCGT CCGGGCGCGC CGCGAGAAGT TGTTGAGCCG GGCCGACGAG GCGTGGCTTG CGAACCTCGC ACGCGAAGCG AAGAACGCCT CCTGA
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Protein sequence | MNQVTESAVQ FDVVTLFPEM FRALTDWGIT SRAVKQERFG LRTWNPRDFT TDNYRTVDDR PYGGGPGMVM LAKPLEAAIN AAKAAQAELG VASTRVVMMS PQGAPFTHER AVRMAQEPGV IVLCGRYEAI DQRLLDRCVD EEISLGDFVL SGGELPAMAM MDAVVRLLPG VLNDAQSAVQ DSFVDGLLDC PHYTRPEEYE GMRVPDVLLG GHHAEIERWR RQEALKNTLR KRPDLIVRAR REKLLSRADE AWLANLAREA KNAS
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