Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0945 |
Symbol | |
ID | 6178637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1038196 |
End bp | 1038744 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641680695 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001807652 |
Protein GI | 172060000 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.962352 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTATTGT CGAATGTGCA GGTTTTGTTA TCGTATTTTT CAGGTTTTCA GAATAAACAA ATGAGAACGC AACGCCAGCC AGTACGCTCG CTCGACAAGC TCGACCGCCG CATCCTCAAA CTGCTGCAGG ACGACGGCCG GATGGCGATG AAGGACCTCG CGGAGCAGGT CGGCCTGACC GTGACGCCGT GCATCGAACG CGTGCGGCGC ATGGAGCGCG ACGGCGTCAT CACCGGCTAT CACGCACGCG TCGATCCGGG CCAGCTCGGC GCCGCACTGC TGGTGTTCGT CGAGATCACC CTCGGCCACA AGGGCGGCAA CATGTTCGAG CAGTTCCGTC GCGAAGTGAT GAAGATCGAC GAGGTGCTCG AATGCCATCT CGTGTCCGGC GACTTCGACT ACCTGATCAA GGCGCGGATC GGTGAAATGG CCGACTATCG CAAGCTGCTC GGCGACATCC TGCTGCAACT GCCCGGCGCG GTGCAGTCGA AGAGCTATGT CGTGATGGAG GAAATCAAGG AAACGCTGAC GATTTCGGTC GGCGAATGA
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Protein sequence | MVLSNVQVLL SYFSGFQNKQ MRTQRQPVRS LDKLDRRILK LLQDDGRMAM KDLAEQVGLT VTPCIERVRR MERDGVITGY HARVDPGQLG AALLVFVEIT LGHKGGNMFE QFRREVMKID EVLECHLVSG DFDYLIKARI GEMADYRKLL GDILLQLPGA VQSKSYVVME EIKETLTISV GE
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