Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0933 |
Symbol | |
ID | 6178592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1026019 |
End bp | 1027011 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641680683 |
Product | ADP-L-glycero-D-manno-heptose-6-epimerase |
Protein accession | YP_001807640 |
Protein GI | 172059988 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCA TCGTCACCGG CGCAGCCGGT TTTATCGGCG CGAACATCGT CAAGGCGCTC AACGAGCGTG GCGAGTCGCG CATCATCGCG GTCGACAATC TGACGCGCGC GGACAAGTTC CGCAACCTCG TCGATTGCGA GATCGACGAC TATCTCGACA AGACGGAATT CGTCGAGCGC TTCACGCGCG GCGATTTCGG CAAGGTACGC GCGGTGTTCC ACGAAGGCGC CTGTTCGGAC ACGATGGAAA CCGACGGCCG CTACATGATG GACAACAACT TCCGCTACAG CCGCGCGGTG CTCGATGCGT GCCTCGCGCA GGGCGCGCAG TTCCTGTATG CGTCGTCGGC CGCGATCTAC GGCGGCTCGA CGCGGTTCGT CGAGGAGCGC GAGGTCGAGG CGCCGCTGAA CGTCTACGGC TATTCGAAGT TCCTGTTCGA CCAGGTGATC CGCCGCGTGC TGCCGAGCGC GAAGAGCCAG ATCGCCGGGT TCCGCTACTT CAACGTGTAC GGCCCGCGCG AGACGCACAA GGGCCGCATG GCATCGGTCG CGTTCCACAA CTTCAATCAG TTCCGCGCGG AAGGCAAGGT CAAGCTGTTC GGCGAGTACA ACGGTTATGC GCCGGGCGAG CAGACGCGCG ACTTCGTGTC GGTCGAGGAC GTCGCGAAAG TGAACCTGTT CTTCTTCGAT CATCCGGAGA AGTCGGGCAT CTTCAACCTC GGCACCGGCC GTGCGCAACC GTTCAACGAC ATCGCATCGA CGGTCGTGAA CACGTTGCGC GCGCTCGACA ACCTGCCGCC GCTGACGCTC GCGCAGCAGG TCGAGCAAGG GCTGATCGAA TACGTGGCGT TCCCCGACGC GCTGCGCGGC AAGTACCAGT GCTTCACGCA GGCCGACCAG ACGAAGCTGC GTGGTGCCGG CTACGATGCG CCGTTCCTGA CCGTGCAGGA AGGCGTCGAC CGCTACGTGC GTTGGCTGTC CGGCCAGGTT TAA
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Protein sequence | MTVIVTGAAG FIGANIVKAL NERGESRIIA VDNLTRADKF RNLVDCEIDD YLDKTEFVER FTRGDFGKVR AVFHEGACSD TMETDGRYMM DNNFRYSRAV LDACLAQGAQ FLYASSAAIY GGSTRFVEER EVEAPLNVYG YSKFLFDQVI RRVLPSAKSQ IAGFRYFNVY GPRETHKGRM ASVAFHNFNQ FRAEGKVKLF GEYNGYAPGE QTRDFVSVED VAKVNLFFFD HPEKSGIFNL GTGRAQPFND IASTVVNTLR ALDNLPPLTL AQQVEQGLIE YVAFPDALRG KYQCFTQADQ TKLRGAGYDA PFLTVQEGVD RYVRWLSGQV
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