Gene BamMC406_0933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0933 
Symbol 
ID6178592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1026019 
End bp1027011 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content64% 
IMG OID641680683 
ProductADP-L-glycero-D-manno-heptose-6-epimerase 
Protein accessionYP_001807640 
Protein GI172059988 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCA TCGTCACCGG CGCAGCCGGT TTTATCGGCG CGAACATCGT CAAGGCGCTC 
AACGAGCGTG GCGAGTCGCG CATCATCGCG GTCGACAATC TGACGCGCGC GGACAAGTTC
CGCAACCTCG TCGATTGCGA GATCGACGAC TATCTCGACA AGACGGAATT CGTCGAGCGC
TTCACGCGCG GCGATTTCGG CAAGGTACGC GCGGTGTTCC ACGAAGGCGC CTGTTCGGAC
ACGATGGAAA CCGACGGCCG CTACATGATG GACAACAACT TCCGCTACAG CCGCGCGGTG
CTCGATGCGT GCCTCGCGCA GGGCGCGCAG TTCCTGTATG CGTCGTCGGC CGCGATCTAC
GGCGGCTCGA CGCGGTTCGT CGAGGAGCGC GAGGTCGAGG CGCCGCTGAA CGTCTACGGC
TATTCGAAGT TCCTGTTCGA CCAGGTGATC CGCCGCGTGC TGCCGAGCGC GAAGAGCCAG
ATCGCCGGGT TCCGCTACTT CAACGTGTAC GGCCCGCGCG AGACGCACAA GGGCCGCATG
GCATCGGTCG CGTTCCACAA CTTCAATCAG TTCCGCGCGG AAGGCAAGGT CAAGCTGTTC
GGCGAGTACA ACGGTTATGC GCCGGGCGAG CAGACGCGCG ACTTCGTGTC GGTCGAGGAC
GTCGCGAAAG TGAACCTGTT CTTCTTCGAT CATCCGGAGA AGTCGGGCAT CTTCAACCTC
GGCACCGGCC GTGCGCAACC GTTCAACGAC ATCGCATCGA CGGTCGTGAA CACGTTGCGC
GCGCTCGACA ACCTGCCGCC GCTGACGCTC GCGCAGCAGG TCGAGCAAGG GCTGATCGAA
TACGTGGCGT TCCCCGACGC GCTGCGCGGC AAGTACCAGT GCTTCACGCA GGCCGACCAG
ACGAAGCTGC GTGGTGCCGG CTACGATGCG CCGTTCCTGA CCGTGCAGGA AGGCGTCGAC
CGCTACGTGC GTTGGCTGTC CGGCCAGGTT TAA
 
Protein sequence
MTVIVTGAAG FIGANIVKAL NERGESRIIA VDNLTRADKF RNLVDCEIDD YLDKTEFVER 
FTRGDFGKVR AVFHEGACSD TMETDGRYMM DNNFRYSRAV LDACLAQGAQ FLYASSAAIY
GGSTRFVEER EVEAPLNVYG YSKFLFDQVI RRVLPSAKSQ IAGFRYFNVY GPRETHKGRM
ASVAFHNFNQ FRAEGKVKLF GEYNGYAPGE QTRDFVSVED VAKVNLFFFD HPEKSGIFNL
GTGRAQPFND IASTVVNTLR ALDNLPPLTL AQQVEQGLIE YVAFPDALRG KYQCFTQADQ
TKLRGAGYDA PFLTVQEGVD RYVRWLSGQV