| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0924 |
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| Symbol | |
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| ID | 6176160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1016550 |
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| End bp | 1017566 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641680674 |
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| Product | prephenate dehydrogenase |
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| Protein accession | YP_001807631 |
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| Protein GI | 172059979 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.420407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGGGCG CGCCGGGTGC GGGCCCGTTG CCCGGGATCT GGACTTCCGT GCGCGGGGCG
TCGTTCCGCG CGCGTCACTT GGCTCTTGTC GTGTCAGGCT TTGCATTCAA CAAACTGGTC
ATTTTCGGCG TCGGCCTGAT CGGCGGATCG CTGGCGCGTG CACTGCGCGA GCGCGCGCCG
GGCGGCGCGG GTGAAGTCGT CGGCGTCGGC CGGTCGCGTG CGTCGGTCGA ACGTGCGCTG
GCACTGGGCG TGATCGATCG CGCGGCGGCG CTCGACGACG ATGCGCAACT GCGCGACGCA
CTGGCCGGCG CCGATCTCGT GCTGCTGGCC GCCCCCGTCG CGCAAACGGG CCCGTTGCTC
GCGCGCATCG CGCCGTGGCT CGACGCCGCG ACGATCGTCA CCGACGCGGG CAGCACGAAG
TCCGATGTCG TCGCGGCCGC GCGCGCAGCG CTCGGTGCGC GGATCGCGCA GTTCGTGCCG
GGGCATCCGA TCGCCGGGCG CGAGTCGAGC GGCGTCGAAG CCGCGCTGCC CGATCTGTAC
GTCGGCCGCA ACGTCGTGCT GTGCCCGCTG CCGGAGAACG CGCCCGCCTC GGTCGCGCGG
ATCGACGCGA TGTGGCGGGC GACCGGCGCC GACGTGCGCA CGATGAGTAC CGAGCAGCAC
GATCGCGTGT TCGCGTCGAT CAGTCATCTG CCGCACGTGC TGTCGTTCGC GCTCGTCGAG
CAGATTCTCG GCGAGGCGGA TGCCGAACTG AAATTCTCGT ATGCGGCGGG CGGCTTTCGC
GACTTCACGC GGATCGCGGC GTCGAGCCCG GAAATGTGGC GCGACGTGTG TGTCGCAAAT
CGCGCGGCGC TGCTCGACGA GCTCGACGGC TACACGCGCG TGCTCGCACG GCTGCGTGCT
GCGATCGACG CCGGCGACGG CGCGGCGCTC GAAGCCGTGT TCACGCGCTC GCGCGCCGCA
CGCAAGGCAT GGCAGGAGCG CGGCGCGCAG CCCGCTGCCG AACCGGTCAA GAAATAA
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| Protein sequence | MQGAPGAGPL PGIWTSVRGA SFRARHLALV VSGFAFNKLV IFGVGLIGGS LARALRERAP
GGAGEVVGVG RSRASVERAL ALGVIDRAAA LDDDAQLRDA LAGADLVLLA APVAQTGPLL
ARIAPWLDAA TIVTDAGSTK SDVVAAARAA LGARIAQFVP GHPIAGRESS GVEAALPDLY
VGRNVVLCPL PENAPASVAR IDAMWRATGA DVRTMSTEQH DRVFASISHL PHVLSFALVE
QILGEADAEL KFSYAAGGFR DFTRIAASSP EMWRDVCVAN RAALLDELDG YTRVLARLRA
AIDAGDGAAL EAVFTRSRAA RKAWQERGAQ PAAEPVKK
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