| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0908 |
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| Symbol | |
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| ID | 6178704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1000616 |
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| End bp | 1002193 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641680658 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001807615 |
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| Protein GI | 172059963 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0101124 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCC GCATCTACGT TCCGCGCGAT TCGTCCGCAC TGGCGCTCGG CGCCGACGCG
CTTGCCGCCG CGATCGTCGC GGAGGCCGAG CGGCGCGGCG TCGCGATCGA ACTGGTCCGC
AACGGTACGC GCGGCTTGCT GTGGCTCGAG CCGCTCGTCG AGGTCGGCAC GGCCGCCGGA
CGCGTCGGCT ACGCGAACCT GTCGGCCGCC GACGTGCCCG CGCTGTTCGA CGCGAACTGG
CTCGACGGCG GCGCGCATCC GAGCGGCGTC GGCCTAGTCG ATGCCCTGCC CTATCTCGCG
CGCCAGCAGC GCCTCACGTT CGCGCGCATC GGCCTGACCG ATCCGCTGTC GATCGACGAC
TACCTGAAGC ACGACGGCCT CGCCGGACTG AAGAACGCGC TCGCGCTCGA CGGCGACGCC
GCGTGCGAGA CGCTGATCGA ATCGGGGCTG CGCGGCCGCG GCGGCGCGGC GTTCCCGGCC
GGCATCAAGT GGCGCACGGT CCGGCAGGCC AGCGCGACGC AGAAGTACAT CGTCTGCAAC
GCGGACGAAG GCGATTCGGG CACGTTCTCC GATCGCCTGA TCATGGAAAG CGATCCGTAC
TGCCTGATCG AAGGGATGAT CATCGCGGGC ATCGCGACGG GCGCGACGCT CGGCTACATC
TACGTGCGCA GCGAATATCC GCACGCGATC GCGGCACTCG AAACCGCGAT CGTGCGCGCC
CGTGAAGCCG GCTGGCTCGG CGAGCACGTG CTCGGCTCCG CGCATGCGTT CGACCTGCAC
GTCGCGAAGG GCGCCGGTTC GTACGTGTGC GGCGAGGAAA CGGCGCTGCT CGAATCGCTC
GAAGGCAAGC GCGGCGTCGT GCGCGCGAAG CCGCCGCTGC CCGCGCTCTC CGGCCTGTTC
GGCCAGCCGA CCGTGATCAA CAACGTGATC ACGCTCGCGA CCGCGCCGGT GATCTTCGCG
CGCGGCGCCG CGTTCTATCG CGACTACGGG ATGGGCCGCT CGCGCGGCAC GCTGCCGTTC
CAGCTCGCGG GCAACATCCG CCACGGCGGG CTCGTCGAGC TCGCGTTCGG CGTCACGCTG
CGCGAGCTGC TGTTCGACTA CGGCGGCGGC ACGGCGAGCG GCCGGCCCGC GCGCGCCGCC
CAGGTCGGCG GCCCGCTCGG CACCTATCTG CCCGAACACC AGTGGGACGT GCCGCTCGAC
TACGAGGCCT ATACGGCCAT CGGCGCGGTC GTCGGCCACG GCGGCATCGT GCTGCACGAC
GACACGTCGA ATCTCGCGGA GCTCGCCGAA TACGCGATGA AGTTCTGCGC GATCGAATCG
TGCGGCAAAT GCACGCCGTG CCGGATCGGA TCGACGCGCG GCGTCGAGAC GATCGCACGC
ATTCGCGAAG GCGACACGTC GGAGCGACAG GTCACGCTGC TGCGCGACCT GTGCGACACG
ATGCTCGCCG GCTCGCTGTG CGCGATGGGC GGGATGACAC CGTACCCGGT GCTGTCCGCG
CTCGATCATT TCCCCGAAGA TTTCGGGCTC GCCGCCGGCA AGCAAGCCGC GTCGGGTCCG
GTCAAGGCTG CGGCCTGA
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| Protein sequence | MTTRIYVPRD SSALALGADA LAAAIVAEAE RRGVAIELVR NGTRGLLWLE PLVEVGTAAG
RVGYANLSAA DVPALFDANW LDGGAHPSGV GLVDALPYLA RQQRLTFARI GLTDPLSIDD
YLKHDGLAGL KNALALDGDA ACETLIESGL RGRGGAAFPA GIKWRTVRQA SATQKYIVCN
ADEGDSGTFS DRLIMESDPY CLIEGMIIAG IATGATLGYI YVRSEYPHAI AALETAIVRA
REAGWLGEHV LGSAHAFDLH VAKGAGSYVC GEETALLESL EGKRGVVRAK PPLPALSGLF
GQPTVINNVI TLATAPVIFA RGAAFYRDYG MGRSRGTLPF QLAGNIRHGG LVELAFGVTL
RELLFDYGGG TASGRPARAA QVGGPLGTYL PEHQWDVPLD YEAYTAIGAV VGHGGIVLHD
DTSNLAELAE YAMKFCAIES CGKCTPCRIG STRGVETIAR IREGDTSERQ VTLLRDLCDT
MLAGSLCAMG GMTPYPVLSA LDHFPEDFGL AAGKQAASGP VKAAA
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