| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0888 |
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| Symbol | |
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| ID | 6177142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 974630 |
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| End bp | 975244 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641680637 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001807595 |
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| Protein GI | 172059943 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.227634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGTCG CCGATCATCG CGGCGGCCGC TACCTGCGCG ATGTCGCCGA CACCTACGCG
CGACATTTCT ATGCGCTCGA CGGCAACCAG ACGATCGTCT CGGCCGCCGG TCGCGGCCCG
CACCGCCGCG ACGTGCTGCT GCATCAGCAG GCCGGCGACG AGATCGGTCA CGACGCGTAT
CGCGCGGCCT GCTACCGCGG CCCCGACGTA TCCGATCGCC TCGCGCTGCT GATGCAGCCG
AACGACTCGA CCTGGTTGTC GATCAACCTG TATCGCGCGC ATCGCAGCGG CGCATTCCAG
CCGCGCGAGA TCGCGGCCAT CGAAACGCTC GCGCCGCTGA TCGCGCAGGC GGCGCAACAT
CACTACGCGC TCGCGGGCTC GACGCAGATC GGCATCCCGC AACTGATGCT CGCGCGGCTG
CGCGGCGCCT GTCCGGCGTT GTCCAAGCGC GAACTCGACG TGCTGCGCGG TGTGCTCGAA
GGCCAGAGCG CGCGGGAAAT CGGCGACACG ATCGGCGTGA AGGCGTCGAG CGTCGTTACC
TACCAGAAGC GCGCGTACCG GCGTCTCGGC ATCTCGAGCC AGCGCCAGCT GTTTGCGCTG
TGCCTGCAAC CGTGA
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| Protein sequence | MSVADHRGGR YLRDVADTYA RHFYALDGNQ TIVSAAGRGP HRRDVLLHQQ AGDEIGHDAY
RAACYRGPDV SDRLALLMQP NDSTWLSINL YRAHRSGAFQ PREIAAIETL APLIAQAAQH
HYALAGSTQI GIPQLMLARL RGACPALSKR ELDVLRGVLE GQSAREIGDT IGVKASSVVT
YQKRAYRRLG ISSQRQLFAL CLQP
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