Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0883 |
Symbol | |
ID | 6177178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 971017 |
End bp | 972276 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641680632 |
Product | hypothetical protein |
Protein accession | YP_001807590 |
Protein GI | 172059938 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0724858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCGCTG TGAAATCGTT CGCGGCAGGC TGCGCGCTGT GGCTCGCGGC GCTGTCGCCC GCCGGCGCGC ACGACGCACC GAAAAGCGCC GATCCGCACG CCGCGCACAT GAGCATGCAG GCTGCGCCGG CGCAACAGAA GCAGCCGCTC GCGACCGGCG CCGCGTTCGA CGCGCGGCAC CGGCTGTGGG TCGCATGGGT CGAAGGCGCG CACGTCGTCG TCGCGCACTC GGACGACGCG GGCCGTACGC TGTCGGCGCC CGTGACCGTC AACGCGATGC CCGAGCCGAT CTACACGAGC GCGGAGAATC GGCCGAAGAT CGCGACGAGC CCCGACGGCC GCTCGGTGTA CGTGTCGTGG TCGATGCCGC TCGATGCGCC GTACACCGGC ATGGTGCGCT TCTCGCGCTC GCTCGACGGC GGGGCGACCT GGAGCGTGCC CGTCACCGTG CATCGCGACC GGCAGGCGAT CACGCACCGC TTCGACATGA TGGCCGTCGA TCCGGCCGGC AACATCGCGA TCGCGTGGAT CGACAAGCGC GATCTCGTCG CGGCGAAGGC GGCGGGGCAC GCGTACGAGG GCGCGGCCGT GTACTACGCG GTGTCGCGCG ACGGCGGCGC GTCGTTCGAG CCCGAGCGCA AGGTGACCGA CCATACGTGC GAATGCTGCC GCATCGCGAT GGCGATCGAT CCGGCCGGAC ACATCGAAGC CGTGTGGCGC AACGTGTTCC CCGGACAGAT CCGCGACCAT GCGCTCGCGG TGTTGCCCGT GTCGGCGTCG GAGCCCGTCG TGCCGGTGCG CGCGACGTTC TCGAACTGGC ATGTCGAGGC CTGCCCCGAG CACGGGCCGG CGCTTGCGAT CACGCCCGAC GGTACGCGTC ATATCGCGTG GTTCGGCGTC GTCGATGGCC GCGCCGACGT GTTTTACTCG CGCATCGGCA CCGACGGCCA GCCGCGCGGC ACGCCGTGGG CATTCGGCGC GAATCCGGCG GCGCCGGCCG AGCAGGCGTC GCATGCGGCG CTCGTCGCGC GTGGTGACGT CGTCTGGCTT GCGTGGAAGG CGTTCGACGG TGAAACGATG CAGATCAAGC TGCGCCGCTC CGACGATCGC GGCGAGCACT GGTCGGCGCC GCGCGTGATC GCGTCGACGT CGGGCGCGAG CGACAATCCA CAACTGCTCG ACGATGCGGG GCGCATCTAT CTGTCATGGC GTACGCGTAA CGACGGCTAC CGGCTGATTC CCGTGGAGGG CGCGCAATGA
|
Protein sequence | MVAVKSFAAG CALWLAALSP AGAHDAPKSA DPHAAHMSMQ AAPAQQKQPL ATGAAFDARH RLWVAWVEGA HVVVAHSDDA GRTLSAPVTV NAMPEPIYTS AENRPKIATS PDGRSVYVSW SMPLDAPYTG MVRFSRSLDG GATWSVPVTV HRDRQAITHR FDMMAVDPAG NIAIAWIDKR DLVAAKAAGH AYEGAAVYYA VSRDGGASFE PERKVTDHTC ECCRIAMAID PAGHIEAVWR NVFPGQIRDH ALAVLPVSAS EPVVPVRATF SNWHVEACPE HGPALAITPD GTRHIAWFGV VDGRADVFYS RIGTDGQPRG TPWAFGANPA APAEQASHAA LVARGDVVWL AWKAFDGETM QIKLRRSDDR GEHWSAPRVI ASTSGASDNP QLLDDAGRIY LSWRTRNDGY RLIPVEGAQ
|
| |