| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0882 |
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| Symbol | |
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| ID | 6178670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 968675 |
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| End bp | 971029 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641680631 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001807589 |
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| Protein GI | 172059937 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.72079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTCA CCTTCGCCGC GCGGCCGTCG CGCGGTCGGC TCGCGCTCGC GTGCGCGGCT
GCTTTTGCGT GGCCTGCCGC ACAGGCGGCT GCGATCGATG GCGCGTCTGC CGAGCCAGTG
CCCGGCGGCT CGGGCAACCC GGCCGGCCGT GCCGCATCGG TTGCCGCGGT CGTGCCCGCG
CCGCCGGGCG ACACGCTGAC CGAGGTCAGC GTCACCGCCC GGCGGCAACC GGTCGATCCG
GACACGCCTG CGGTCGTCGA GTCGATCACG CGCGAGCAGA TCGACGCGCA CACCAACGTC
ACGACCGAGG ACGCGCTGAA GTACGCGCCC AACCTGATGG TTCGCAAGCG CTACATCGGC
GACCGCAACA GCGTGTTCGC CGGCCGCGAC TTCAACGAAC TGCAGAGTGC GCGCGGGCTC
GTGTATGCCG ATGGCCTGCT GCTGTCGAAC CTGCTCGGCT CGAGCTATGC GTACCCGCCG
CGCTGGTCGC TGATCGCGCC CGACGATATC GAGCGCGTCG ACGTGCTGTA TGGCCCCTTT
TCCGCGCTGT ACCCCGGTAA CGCGATCGGC TCGACCGTGC TGCTGACCAC GCGGCGGCCC
GACAAACTCG AGGCGTCGCT GTCGACGCAG TTCTTCACGC AGCGCTATCA CGACGGCTAC
GGGCTGGCGG ACAGCTTCGG CGGCAATCAC CAGACCGCGC GGATCGCGAA CCGGATCGGC
AAATTCTGGT TCTCGCTGTC GCTCGACCGG CTGGAGAACG ACGGTCAGCC GATGCAGTAT
GCAAGCCCCA ATTCCGCGTA CAACCCGAAG CTCGGCGCCG CGGTGCCGGT CACAGGCGCG
GCCACCGACG TCGGACCCAA CGGCAAGCCG CGCACGATCG TCGGTGCGCA GAACATCGAG
CGCACCGAGC AGCTCAACGA GACGGTCCGG ATGGGCTATG CGTTCACGGA CCGCGTCGAC
GCGACGCTGA CGCTCGGGCA CTGGGAGAAC CATTACCGGC AGCACGGCGA GACCTTCCTG
CGCGACGCGG CCGGCAATCC CGTCAACGGC GGCAACGTGT CGATCGGCGG CCGGAACATG
ACCGTCGCGC CGAGCGCGTT CGCGCCGCAG CGCGGCGACC AGGAGAACTG GCTGTACGCG
CTCGGCCTGA ACGGCCGGCT CGATTCGGGC TGGCGGCTGT CGGGCGTGGT GTCCGCCTAC
GACGTGTCGC GCGACGTGCT GCGCGCGGCA TCGACCGCGC AAGGCGGGGC GGGCACGCTG
TTCCAGGGCG ACGGCACGGG CTGGCGCACG CTCGACCTGA AGGCCGAGGC GCCGGAAGTG
AAGGGCCACA CGTTCACGTT CGGCTATCAC TACGACAACT ATTTCCTGCG CAACGTCACG
TACAACACGG CCGACTGGCT GGCCGGGCCG ACCACCTCGC TCGCGAGCGT CTATCAGGGC
GACACGCGTA CGCAGGCGCT GTTCGCGCAG GACGCGTGGC GTTTCGCGCC CGGCTGGCTC
GCGACCCTCG GCCTGCGCTA CGAGCGCTGG GATGCATACG GCGGCGCGCT CGGCAACGCG
GGCGGCACGG TCGGTTACGC GGACCGCGGA GCGAATGCGC TGTCGCCGAA AGTCGCGCTG
CAGTGGGACG CGACGGACGT CTGGCGCTTC CGGGTGTCGT TCGCGACGGG CACGCGCTTT
CCGACGGTCG GCGAACTGTT CCAGGGCACG ATCTCGAACA ACGCGATCGT CAACAACAAC
CCGAGCCTGC GGCCGGAAAA GGCGATCGAC TGGGACTTCA CGGCCGAGCG CGACGTCGGT
GTCGGCGTCG TGCGCGCGAG CGTGTTCCAG AGCGACCTGC GCGATTCGAT CTACAGCCAG
ACGACGGTGT CGGGCGCGTC GACCGTCACC AACATCTCGA ACGTCGATCG CGTGCGCGTG
CGCGGCGTCG AACTCGGATT CAGCGGCCGC AACGTCGGGC TGCGCGGGCT CGACATCGAC
GCGAACGTGT CGGCGAGCAA TGCGCAGATC CTGGCCGACA CCGCGAACCC CGCGTACGTC
GGCTCGCGCT TTCCGCGCAT CCCGCGCATG CGCGCGAACC TGCTCGCGTC GTACCGCTTC
GACGAGCACT GGCTCGCGAG CGTCGGCGTC CGGTACTCCG GTCGCCAGTT CAACACGCTG
GACAACAGCG ACGTGAATCC GGACGTGTAC GGCGGCACGA GCAGCTTCAC GGTCGTCGAC
CTGAAGGCGC GCTACCGGTT CGATCGTCAC TGGACCGCCT CGGTCGGCAT CGACAACCTG
ACGGACCGCC GCGACTACGT GTTCCACCCG TATCCGGGCC GCACTTTCTT TGGAGAACTG
AAATGGTCGC TGTGA
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| Protein sequence | MSFTFAARPS RGRLALACAA AFAWPAAQAA AIDGASAEPV PGGSGNPAGR AASVAAVVPA
PPGDTLTEVS VTARRQPVDP DTPAVVESIT REQIDAHTNV TTEDALKYAP NLMVRKRYIG
DRNSVFAGRD FNELQSARGL VYADGLLLSN LLGSSYAYPP RWSLIAPDDI ERVDVLYGPF
SALYPGNAIG STVLLTTRRP DKLEASLSTQ FFTQRYHDGY GLADSFGGNH QTARIANRIG
KFWFSLSLDR LENDGQPMQY ASPNSAYNPK LGAAVPVTGA ATDVGPNGKP RTIVGAQNIE
RTEQLNETVR MGYAFTDRVD ATLTLGHWEN HYRQHGETFL RDAAGNPVNG GNVSIGGRNM
TVAPSAFAPQ RGDQENWLYA LGLNGRLDSG WRLSGVVSAY DVSRDVLRAA STAQGGAGTL
FQGDGTGWRT LDLKAEAPEV KGHTFTFGYH YDNYFLRNVT YNTADWLAGP TTSLASVYQG
DTRTQALFAQ DAWRFAPGWL ATLGLRYERW DAYGGALGNA GGTVGYADRG ANALSPKVAL
QWDATDVWRF RVSFATGTRF PTVGELFQGT ISNNAIVNNN PSLRPEKAID WDFTAERDVG
VGVVRASVFQ SDLRDSIYSQ TTVSGASTVT NISNVDRVRV RGVELGFSGR NVGLRGLDID
ANVSASNAQI LADTANPAYV GSRFPRIPRM RANLLASYRF DEHWLASVGV RYSGRQFNTL
DNSDVNPDVY GGTSSFTVVD LKARYRFDRH WTASVGIDNL TDRRDYVFHP YPGRTFFGEL
KWSL
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