| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0879 |
|---|
| Symbol | |
|---|
| ID | 6175946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 967000 |
|---|
| End bp | 967593 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641680628 |
|---|
| Product | chorismate mutase |
|---|
| Protein accession | YP_001807586 |
|---|
| Protein GI | 172059934 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1605] Chorismate mutase |
|---|
| TIGRFAM ID | [TIGR01806] chorismate mutase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.512068 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAG CCATTCGTGC CAGCGTCGCT GTCGCCGCAC TCGGCGTCGC CCTTTTTTCG
TCGCCGCCCG TCGCGCGCGC CGACGGCGAC GACACCGCGC TCACCAACCT CGTCGCGCTC
GCGTCGCAGC GGATCGCGCT TGCCGAACCC GTCGCACGCT GGAAATGGGC GAACCACAAG
GCGATCGAGG ACCAGCCGCG CGAAGCCGCA CTGCTCGCAT CGGTGGAGAA GCGCGCCGCA
CAGTCGGGCG TGGATCCGGC GTTCGCGCGT ACGTTCTTCG AGGATCAAAT CGCCGCGAGC
AAAGACGTGC AGAACGCGCT CTTTGCCACC TGGCGCGCGA CGCGGCCGCC CGAAGGCACG
CCGCCAGACC TCGCGACCAG CACGCGGCCG GCGCTCGACC GGCTCACGCA AAAGATGCTG
GCCGGCCTCG CGCGGATCGC GCCGCTGCGC GACGCGCCCG ATTGCCAGGC GCGGCTTGCC
CGCAGCATCG CGAACTGGAA GACGCTCACC CGCTACGACG CGAGCCGCAC GCAAGCGCTC
GACACCGCGC TGTCGCACGT GTGCTCGGCC GGCGGCGCCA GCGCGATCGG CTGA
|
|---|
| Protein sequence | MKQAIRASVA VAALGVALFS SPPVARADGD DTALTNLVAL ASQRIALAEP VARWKWANHK
AIEDQPREAA LLASVEKRAA QSGVDPAFAR TFFEDQIAAS KDVQNALFAT WRATRPPEGT
PPDLATSTRP ALDRLTQKML AGLARIAPLR DAPDCQARLA RSIANWKTLT RYDASRTQAL
DTALSHVCSA GGASAIG
|
|---|
| |