| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0840 |
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| Symbol | |
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| ID | 6178900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 928847 |
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| End bp | 930094 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680584 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001807547 |
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| Protein GI | 172059895 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.961003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTC GCTCGATCAT GGGCGCGCTC TGCGCCGCGG GTCTGATGGC TGGCGCCGTG
GCGGCGCAGG CGGCCGAGAA CGTAACGGTG CTGCACTGGT GGACCTCGGG CGGCGAGTCG
AAGGCCGTCG GCGTGCTGAA GGACGACCTC CAGAAGCAGG GCTACGTGTG GAAGGACTTC
GCGGTCGCGG GCGGCGCGGG CGCGGCGGCC ATGACCGCGC TGAAGACCAA GGTGATCAGC
GGCGACTCCC CGTCGGCCGC GCAGATCAAG GGCCCGCTGA TCCAGGACTG GGCCGACCAG
GGCGTGCTCG TCAACATCGA TTCCGCTGCC GGCGACTGGA AGCAGAACCT GCCGCCGGAA
ATCGACAAGA TCATCAAGTA CAAGGGCCAT ACCGTCGCCG CGCCGTTCTC GGTGCACCGC
GTGAACTGGC TCTATATCAA CAAGGCGGCG CTCGACAAGG TCGGCGCGAA GGTGCCGACC
ACCTGGCCTG AGTTCTTCGC GGTGGCCGAC AAGCTGAAGG CCGCGGGCAT TCAGCCGGTC
GCGATGGGCG GCCAGCCGTG GCAGGACCTG ACACTGTGGG AAGACGTCGT GCTGTCGCAG
GGTCCGGCGT TCTACAAGAA GGCGCTCGTC GATCTCGACC AGGCCACGCT GAATTCGCCG
CAGATGGTGT CGGTGTTCGA CACGGTGCGC AAGATCCAGG GCTACTTCGA CACCGGCCGC
AACGGCCGTG ACTGGAACCT CGCGACCGCG ATGGTGATCA ACGGCAAGGC CGGCATGCAG
TTCATGGGCG ACTGGGCGAA GGGCGAGTTC GAGAACGCGG GCAAGAAGGC CGGCAAGGAC
TATATCTGCG CACCGGTGCC CGGCACGGCG AATTCGTACA CGTTCAACGT CGACTCGTTC
GTGTTCTTCC AGCAGAAGGG CCAGAAGGAC GCGACGCCGG GCCAGATCGC GCTCGCGAAG
ACGATCATGA CGCCGGCCTT CCAGGAGCAG TTCAGCTTGC TGAAGGGCTC GGTGCCGGTA
CGCCTCGGCG TGAAGATGGA CAAGTTCGAC GACTGCGCGA AGAAGTCGTA TGCCGACGAG
CAGACCGCGA TCAAGTCGGG CGGCTTCGTG CCGTCGCTCG CGCACGGGAT GGCGCAGGGC
GACGCGACGG CCGGCGCGAT CACCGACGTC GTCACGAAGT TCATGAACTC GCAGCAGGAT
TCGAAGAGCG CGGTCGCCGC GCTCGCGAAA GCCGCGAAGG TGAAGTAA
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| Protein sequence | MKVRSIMGAL CAAGLMAGAV AAQAAENVTV LHWWTSGGES KAVGVLKDDL QKQGYVWKDF
AVAGGAGAAA MTALKTKVIS GDSPSAAQIK GPLIQDWADQ GVLVNIDSAA GDWKQNLPPE
IDKIIKYKGH TVAAPFSVHR VNWLYINKAA LDKVGAKVPT TWPEFFAVAD KLKAAGIQPV
AMGGQPWQDL TLWEDVVLSQ GPAFYKKALV DLDQATLNSP QMVSVFDTVR KIQGYFDTGR
NGRDWNLATA MVINGKAGMQ FMGDWAKGEF ENAGKKAGKD YICAPVPGTA NSYTFNVDSF
VFFQQKGQKD ATPGQIALAK TIMTPAFQEQ FSLLKGSVPV RLGVKMDKFD DCAKKSYADE
QTAIKSGGFV PSLAHGMAQG DATAGAITDV VTKFMNSQQD SKSAVAALAK AAKVK
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