Gene BamMC406_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0838 
Symbol 
ID6177070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp926180 
End bp926860 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content71% 
IMG OID641680582 
Product6-phosphogluconolactonase 
Protein accessionYP_001807545 
Protein GI172059893 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 
TIGRFAM ID[TIGR01198] 6-phosphogluconolactonase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAGA TTCACGCTTT CGACACCCAG GAAGCTCAAA GCGAGGCGCT CGCGCGCGCC 
GTGGGCGATG CGCTGCGCGC CGCGCTCGGC GGCCCCGCGC GCCCGACGCT CGCGGTGTCC
GGCGGCACGA GCCCGCGCCC GTTCCTGCAA ACGCTGTCGC ACGCGGCGCT CGACTGGGCC
GGCGTCGACG TCACGCTGGT CGACGACCGC TGGGTGCCGG AGGACGACGC GGCCAGCAAC
GCGCACCTCG TGCGCGACAC GCTGCTGCAG CACGCGGCGG CCCCTGCCCG CTTCCTGCCG
CTCGTCGACA CCAGCACTGC GCTCGACGCG CACGTCGCCG CGCTGAACGC GAACGCCGAC
TACCGCGTGC CGACCGTCGC CGTGCTCGGC ATGGGCGAGG ACGGCCACAC CGCGTCGATC
TTCGCGGACG CGCCCGAATG GGACCACGCG ATCACGACGC CCGAGCGCTT CGTCGCCGTG
CATCCCGGTG CCGCGCCGCA TGCGCGCGTG AGCTTTTCGC TCGATGCGCT GAAACGCGTC
GACCGGCTCT TCCTGTTGAT CGCGGGCAGC CGCAAACGCG ACGTGCTCGA CGCCGCGGCC
GCCACGCTGC AGAAGAACGC GATTTCCCAC CTGGCCAACG ACAAGGGGAC CAAGCTCGAT
GTCTACTGGT GCGCAAAGTA A
 
Protein sequence
MIEIHAFDTQ EAQSEALARA VGDALRAALG GPARPTLAVS GGTSPRPFLQ TLSHAALDWA 
GVDVTLVDDR WVPEDDAASN AHLVRDTLLQ HAAAPARFLP LVDTSTALDA HVAALNANAD
YRVPTVAVLG MGEDGHTASI FADAPEWDHA ITTPERFVAV HPGAAPHARV SFSLDALKRV
DRLFLLIAGS RKRDVLDAAA ATLQKNAISH LANDKGTKLD VYWCAK