| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0823 |
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| Symbol | |
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| ID | 6176737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 911911 |
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| End bp | 913029 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641680569 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001807532 |
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| Protein GI | 172059880 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.600223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCTT GGTTATCGTG GCGTCCCAAT GAGCAGCATG CGCAGATCGT GCGCGACATG
CTGCGTCGCG GGACGCGTGT CAGTCACCAT TTATTCAGCG TTGTCGGCTG TTTCGCCGTC
GCGATCGCAC TGGCCCTGTG GCTGCTGCCG ACCGTGCGCG GGAACATCGC CGCGAAGCTG
ATGCCGGTCG TGTCCGCGGC CGTGCAGGCC GGTCCGGCCC GTCTGCTGAC CGGTCACCCG
CTGCCGAACT TCGCGCCTGC CGGCGCGCAG CCGCAGCAGG AAGACACCCC CGAACCGGAT
GCGCTCGCCG TCGGTCTCGA CGTCGCACCG GAAACCGCCG CGCAGAACGA TGCGTCCGAT
CCGGCCCGCA ACGGCCCGTC GCCCGTCGCG CTCGCGAAAC TGATCCCGAC CCAGCGGGTT
CCGGCCGATG CGCGCGACGA TCGTGCGCTC GCGTCGAACC GTGAGCAGGC GCTCGTCGCC
ACCTACCTGT CGCGCCGTTA CCGGGTCGCG CAGGAGCCGC TCGGCCAGCT CGTCAAGGCT
GCGTTCCAGA CGGGGCGCGA CGTCGGCCTC GATCCGCTGC TGCTGCTGTC CGTGATGGCG
ATCGAATCGG GCTTCAACCC GTACGCGGAA AGCGGCGTCG GCGCGCAAGG CCTGATGCAG
GTCATGTCGA AGGTCCATTC CGACAAGTTC GAATATTTCG GCGGTACCGA CACCGCGCTG
CAACCGCTCG CCAACCTGCA AGTGGGCGCG CTGGTGCTGA AGGATTGCAT CGCCCGCGGC
GGCTCGCTCG CGAACGGCCT GCGCATGTAC AACGGCTCGA CGAACCCGGA CGACACCGCC
TACGGCTCGA AGGTCATGGC CGAGCGTGCC CGCCTGCGCG ACGTCGCGCA TGGCCGCAGC
GTGCCGCTCA ATGCGCCGGC CCAGCCGTCG AAGCCGATCG TGACCGCGTC CGCGACGGCA
GTTGCCGGCG GCGCGAAGCG CGTGCACGCG ACGCTCGACG CCGCGCAGCC GATCGCCGCG
AAGGCTGCCG CCGTGCCGAA GGGCGCGCCG CAGCAGGACG CCGCAAGCGT CGACACCGCG
AAGCAGTCGC ACGGCGACCA CCCGGAACTC GGCGCGTAA
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| Protein sequence | MNAWLSWRPN EQHAQIVRDM LRRGTRVSHH LFSVVGCFAV AIALALWLLP TVRGNIAAKL
MPVVSAAVQA GPARLLTGHP LPNFAPAGAQ PQQEDTPEPD ALAVGLDVAP ETAAQNDASD
PARNGPSPVA LAKLIPTQRV PADARDDRAL ASNREQALVA TYLSRRYRVA QEPLGQLVKA
AFQTGRDVGL DPLLLLSVMA IESGFNPYAE SGVGAQGLMQ VMSKVHSDKF EYFGGTDTAL
QPLANLQVGA LVLKDCIARG GSLANGLRMY NGSTNPDDTA YGSKVMAERA RLRDVAHGRS
VPLNAPAQPS KPIVTASATA VAGGAKRVHA TLDAAQPIAA KAAAVPKGAP QQDAASVDTA
KQSHGDHPEL GA
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