| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0797 |
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| Symbol | |
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| ID | 6178367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 889755 |
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| End bp | 891374 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641680545 |
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| Product | urea ABC transporter, permease protein UrtB |
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| Protein accession | YP_001807509 |
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| Protein GI | 172059857 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTACCC GCTTTCGCCG CGCCGCCGTC GCGGTCGTCG CCTGTGCCGC GCTGGCCTGC
GCGCTGCCGC GCGCCGCGTT CGCCCTGACG GCCGCCGATA CCGCCGCGCT CGCCGGCGAC
GACTTCGACG CGAAAACCTC CGCGATCGAA CGGATCGCCG CCGACGCCGA TCCGCGCGCC
GTCGCGCTGC TCAATGCGCT GTCGACCGGC GACGCGCTCG CGACCGGCGA CGGCCGGCTG
CTGATCCAGA CCGGCGACAC CGCACACGAT GCGCTGACGC AGGCCGCGAC GCCGGCCGGC
GACGCGCAGC CCGTCATGCT GAACAACCTG CTGCGCACGA AGATCGCCGC CGCGCTGTCG
GGGCTCGCGC TCGCATCGCC CGATGTCGCC GCGCGTCGCG ACGCGATCGA CGCGCTGCTG
AAGTCGCCCG ACCCGGCACT CAAGCCGATG ATCGAGCGCG CACGCGCAAA GGAAACCGAC
CCGGCATTGA AGCGCCGCCT CGACGCACTG TGGGCCATCG CCGCGCTGCA CGATGCCGAT
CCGGCGAAGC GACTCGACGC CGTGCAGGTG GTGGCCGCGC GCAGCGATCT CGACATGATC
GAGCAGTTGC GCCCGCTCGT CGCGAAGAAC GCCGACGGCA GCTACACCGA ACCCGACGCG
CGCGTACGCA CAGCCGCGCA GCAAGGGCTC GACGCGTTGC ACGCGCTGCA GCGCCGCGGC
GAGATCGTGG GCACCGTGTT CGCGGGTCTG TCGCTCGGCA GCGTGCTGCT GCTCGCGGCG
CTCGGCCTCG CGATCACGTA CGGGCTCATC GGCGTGATCA ACATGGCGCA CGGCGAATTC
CTGATGATCG GTGCGTACGC AACCTATGTC GTGCAGACGC TGATCCAGCG CCATGCGCCG
GCCGCGTTCG ACTGGTATCC CCTCGTCGCG GTGCCCGTGT CGTTCGCGGC GGCCGCGCTG
GTCGGCATCG TGCTTGAACG GCTCGTGCTG CGGCATCTGT ACGGCCGCCC GCTCGAGACG
CTGCTCGCGA CGTTCGGCGT GAGCCTGATC CTGATCCAGG CGACGCGCAT GCTGTTCGGC
GCGCAGAACG TGCAGGTCGT GAATCCGTCG TGGATGAGCG GCGGCGTGAC CGTGATGCAG
AACCTGATCC TGCCGTACAA CCGGCTCGCG ATCCTCGCGT TCGCGCTCGC GGTCGTGTTC
GTCGCGTGGG CAGTGCTGAC GAAGACGCGG CTCGGCCTGT TCGTGCGCGC GGTCACGCAG
AATCGCCGGA TGGCCGCGTG CGTCGGCGTG AAGACCGCGC GCGTCGATGC GTATGCGTTC
GCGTTCGGCG CGGGCATCGC AGGCCTCGGC GGCTGCGCGC TGTCGCAGAT CGGCAACGTG
GGCCCCGATC TCGGGCAGAA CTACATCATC GATTCGTTCA TGGCGGTGGT GCTCGGCGGC
GTCGGCCAGA TCGCCGGCAC CGTGCTCGGC GGCTTCGGGC TCGGTCTCGT CAGCAAGGCG
ATCGAACCGT TCTGGGGTGC CGTGCTCGCG AAGATCGCGG TGCTCGTGAT GATCGTGCTG
TTCATCCAGA AACGTCCGCA GGGCATGTTC GCCCCGAAGG GCCGCAGCGC GGAGGCGTGA
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| Protein sequence | MPTRFRRAAV AVVACAALAC ALPRAAFALT AADTAALAGD DFDAKTSAIE RIAADADPRA
VALLNALSTG DALATGDGRL LIQTGDTAHD ALTQAATPAG DAQPVMLNNL LRTKIAAALS
GLALASPDVA ARRDAIDALL KSPDPALKPM IERARAKETD PALKRRLDAL WAIAALHDAD
PAKRLDAVQV VAARSDLDMI EQLRPLVAKN ADGSYTEPDA RVRTAAQQGL DALHALQRRG
EIVGTVFAGL SLGSVLLLAA LGLAITYGLI GVINMAHGEF LMIGAYATYV VQTLIQRHAP
AAFDWYPLVA VPVSFAAAAL VGIVLERLVL RHLYGRPLET LLATFGVSLI LIQATRMLFG
AQNVQVVNPS WMSGGVTVMQ NLILPYNRLA ILAFALAVVF VAWAVLTKTR LGLFVRAVTQ
NRRMAACVGV KTARVDAYAF AFGAGIAGLG GCALSQIGNV GPDLGQNYII DSFMAVVLGG
VGQIAGTVLG GFGLGLVSKA IEPFWGAVLA KIAVLVMIVL FIQKRPQGMF APKGRSAEA
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