| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0796 |
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| Symbol | |
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| ID | 6178235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 888569 |
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| End bp | 889753 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641680544 |
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| Product | urea ABC transporter, permease protein UrtC |
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| Protein accession | YP_001807508 |
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| Protein GI | 172059856 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCAA TCACCGATTC GTTGTCGAAC CCGGTCGCCG GTGCGCCGAA ACCCGCCGCC
GTGCCCACGA AGGAAGGCTT CGCGCTCGGC CTGCCGCCGC GCCCCGCGCT GCTGTCGCGC
CGCGCATGGC TCGCGCTCGT CGCGCTGTGC ATCGCGATCG GCGCCGGCGT GCCGCTGGCC
GCGCTGGTCG CGCCCGAGTC GAGCGCGTTC CATCTGTCCG CGTATGCGAT GACGCTGGGC
GGCAAGCTGA TGTGCTACGC GATCGCCGCG CTCGCGCTCG ATCTCGTGTG GGGCTACTGC
GGCATCCTCA GTCTCGGCCA CGGGCTGTTC TTCGCGCTCG GCGGCTATGC GATCGGCATG
TACCTGATGC GCGAGATCGG CCGCGACGGC AAGTACGGCA GCGACCTGCC CGACTTCATG
GTGTTCCTCG ACTGGCATCA GCTGCCCTGG TACTGGAGCG GCACGCAGCA TCTCGCGTGG
GCGCTCGCGC TGGTCGTGCT GGTGCCGGCC GTGCTCGCGT GGGTGTTCGG CTTCTTCACG
TTCCGCTCGC GCGTGAAGGG CGTGTACCTG TCGATCATCA CGCAGGCGCT GACGTTCGCC
GCGATGCTGC TGTTCTTTCG CAACGAGACG GGCTTCGGCG GCAACAACGG CTTCACCGAC
TTCAAGCGCA TCGCCGGGTT TGCGATCACG TCGCCCGGCA CGCGCACGGT GCTCTTGCTG
CTGACCTTCG CGACGCTCGT GCTCGCGTTC ATCGCCGCGC GCGCGATCGT CACGAGCAAG
CTCGGGCGCG TGGTCACCGC GGTGCGCGAC GGCGAGACGC GGCTGATGTT CCTCGGCTAC
AGCCCGCTCG CGTACAAGCT GTTCGTGTGG ACGCTGTCGG CCGTGCTGTG CGGCATCGCG
GGCGCGCTGT ACGTGCCACA GGTCGGCATC ATCAATCCCG GCGAGATGTC GCCCGGCAAC
TCGATCGAAA TGGCGATCTG GGTCGCGGTG GGCGGGCGCG GCACGCTGAT CGGGCCGATT
GTCGGCGCGT TCGCGGTGAA CGGCGCGAAG AGCTTCTTTA CCGCGTACTT CGCCGAATAC
TGGCTGTTCT TTCTCGGCCT GATCTTCGTG CTGGTGCCGC TGTTGCTGCC GCGCGGGATC
ATGGGCCTCG TCGACACGCT GCTTGCGAAG GGGAAACGCG GATGA
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| Protein sequence | MTSITDSLSN PVAGAPKPAA VPTKEGFALG LPPRPALLSR RAWLALVALC IAIGAGVPLA
ALVAPESSAF HLSAYAMTLG GKLMCYAIAA LALDLVWGYC GILSLGHGLF FALGGYAIGM
YLMREIGRDG KYGSDLPDFM VFLDWHQLPW YWSGTQHLAW ALALVVLVPA VLAWVFGFFT
FRSRVKGVYL SIITQALTFA AMLLFFRNET GFGGNNGFTD FKRIAGFAIT SPGTRTVLLL
LTFATLVLAF IAARAIVTSK LGRVVTAVRD GETRLMFLGY SPLAYKLFVW TLSAVLCGIA
GALYVPQVGI INPGEMSPGN SIEMAIWVAV GGRGTLIGPI VGAFAVNGAK SFFTAYFAEY
WLFFLGLIFV LVPLLLPRGI MGLVDTLLAK GKRG
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