| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0772 |
|---|
| Symbol | |
|---|
| ID | 6178348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 861382 |
|---|
| End bp | 862458 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641680520 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001807484 |
|---|
| Protein GI | 172059832 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.494029 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTTGG GGGTGGACAT CACCTGGATG GTCGGCAACT ACCGCGGCAT GGGGCGTTTT
GCCCGTCAAC TGGTGGCGCC GATCGGCGAG TCGGTGCTGG GCTTTGCGCC AGACGGCGTG
AGCACCGACG AATGGCCGTG CGTCAGCCAA GGGCGCCGTT TCTTCCCGTG GTGGGAGCAG
GTCGAGTTGC CGCGGTTGTG CCGCGAGCAT AAACCGGACT ATCTGCTGTG CCCGTACAAC
ACCGGGCCGC TGCGCGCCAC CGGCAACACG CCATTGATCG CGGTCATTTA CGATCTGATC
TACATGCAGC CGTGGAGCGT GCTGCCGCCT GCGAGGTCGC TGTATCAGAC CGCCGGGCGC
GTGTATCGCC GCCATGTGGT GCCGCGGCTG GCGCGCCGGG CCGACGTCGT GCTGACCATC
TCGCGGTTTA CGCAACGGGA GCTGGTCGAA ACGTTCGGGC TGAACGAGGC GGACGTGCAC
GTCATCCCGT GCATGATTTC GGACGACTGG TTCGACGCGC CGGTGAGCGC GGCGGCACGT
CGGCCGTACC TGTTCACGGT CGCGGGCGAG GTGCCGAGCA AGAACGTCGA TCGCCTCCTG
CAGGCGTTCG CGATCGCGCG GCCGGCGCTC GGCGATGACG CCACGCTCCG GATCGCCGGG
ATCAAGTCCG AACATCACGC GCATTTTCTC GGGCGGGCGG CAGCGCTCGG CCTCGCGGGT
GCGGTCGAGT TGCTCGGCTA TATTTCGCGG GACGAGTTGC GCGAGCAGTA TCGGCACGCA
CATGCGTTCA TCTTTGCTTC GTTGTTCGAA GGGTTCGGCA TTCCGCTGCT GGAGGCGATG
GCGTCGGGCA CACCGGTTGC GTGCAGCAAT ACGACGTCGA TGCCCGAGGT CGTCGGCGAC
TGCGGCCTGC AGTTCGATCC CTTTTCGGTG GACGACATGG CCGAGCAGAT TCGCAGGGTA
TGGAACGACG GCGCGCGATT CGACGTCGCG ATCCGCGACG GTGTCGCCCG CGCACGCACC
TTTTCGGAGT CGGCGGTGCG TCCGCTGATT CAGGATTTCT GGGCGCGTCT ATCATGA
|
|---|
| Protein sequence | MKLGVDITWM VGNYRGMGRF ARQLVAPIGE SVLGFAPDGV STDEWPCVSQ GRRFFPWWEQ
VELPRLCREH KPDYLLCPYN TGPLRATGNT PLIAVIYDLI YMQPWSVLPP ARSLYQTAGR
VYRRHVVPRL ARRADVVLTI SRFTQRELVE TFGLNEADVH VIPCMISDDW FDAPVSAAAR
RPYLFTVAGE VPSKNVDRLL QAFAIARPAL GDDATLRIAG IKSEHHAHFL GRAAALGLAG
AVELLGYISR DELREQYRHA HAFIFASLFE GFGIPLLEAM ASGTPVACSN TTSMPEVVGD
CGLQFDPFSV DDMAEQIRRV WNDGARFDVA IRDGVARART FSESAVRPLI QDFWARLS
|
|---|
| |