Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0742 |
Symbol | |
ID | 6178310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 830602 |
End bp | 831846 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641680490 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001807454 |
Protein GI | 172059802 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0018802 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGATTTCG ACGTCATCGT TCTGGGGGCC GGCATCGTCG GCGTGTCGTC GGCGCTGCAT CTGCAGGATC GCGGGCTGCG GGTCGCGCTC GTCGACCGGC GCGCGCCCGG CGAGGAAACC AGCCACGGTA ATGCCGGGCT GATCGAGCGC TCGTCGGTCG TGCCGTACGC GTTCCCGCGC CGGCTCGGCA CGCTGCTGCG CTACGCGCGC AACCGCTCGG TCGATCTCTA TTGGGACTAC AAGGCGCTGC CCGCGTACGC GGGCTGGCTC GCGCGCTTCT GGCGCGAATC GTCGCCGCAG CGCCTCGCGG CTGCCGCGCG CGACATGCTG CCGCTCGTCG CGGCGAGCGT CGTCGAGCAC GACGCGCTGC TCGCGCGCAC CGACGCGCAG CCGCTCGTGC ATGACGGCGG GTGGCTCGAG GCGTTCCGTT CGCCCGCGCT GTTCGAGGCG GAAACGCGCG CGCAACAGCG GATGGCCGAC GCGCACGGGT TGCGGATGAG CGTGCTCGAC GCGCGCGCGC TGCGCGAGCG CGAGCCCGGC ATCGGCGACG CATTCTGCGG CGCGTTCCAC TGGCAGGATC CGAAGACCGT GTCGAGCCCC GGCGGCCTCA CGAAAGCGTA CGCGCGGCTG TTCGAGCGCG ACGGCGGCAC GTTCGTGCAC GGCGATGCGA CGACGCTCGC GCAGGTGCGC GATGGCTGGC AGGTCGATAC CGAACACGGG CCGATCTCGG CGCGGTCGGT CGTGGTCGCG CTCGGGCCGT GGTCCGATCA CGTGTTTGCG CCGCTCGGCT ATCGGATTCC GCTGCGCGCG AAGCGCGGCT ATCACATGCA TTACCTGCCG ACTCGCGCGC CGCTGAACGT ACCGGTGTGC GATACCGAGG CGGGTTTCGT GGTCGCGCCG ATGGAGGGCG GCCGCCTGCG CCTCACGACC GGCGTCGAGA TCGCGTTGCG CGACGCGCCG CCGACCGGCG TGCAGCTCGC GCGTGCCGAG CCGCTCGCGC GCGACGCGTT CGGCATCGGC GAGCGGCTCG ATCCGGCTCC GTGGCTCGGG ATGCGGCCGT GCACGCCCGA CATGCGGCCG GTGGTCGGAC CGGCGCCTCG CCATCGTCAT CTGTGGTTCG CGTTCGGGCA TTGCCACCAC GGGCTCACGC TCGGCCCCGC GAGCGGACGG CTGCTCGCCG AAATGATCAC CGGTGCGCCG ACCTACATCG ATCCCCATCC GTACCGGCCC GCGCGTTTCG GCTGA
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Protein sequence | MDFDVIVLGA GIVGVSSALH LQDRGLRVAL VDRRAPGEET SHGNAGLIER SSVVPYAFPR RLGTLLRYAR NRSVDLYWDY KALPAYAGWL ARFWRESSPQ RLAAAARDML PLVAASVVEH DALLARTDAQ PLVHDGGWLE AFRSPALFEA ETRAQQRMAD AHGLRMSVLD ARALREREPG IGDAFCGAFH WQDPKTVSSP GGLTKAYARL FERDGGTFVH GDATTLAQVR DGWQVDTEHG PISARSVVVA LGPWSDHVFA PLGYRIPLRA KRGYHMHYLP TRAPLNVPVC DTEAGFVVAP MEGGRLRLTT GVEIALRDAP PTGVQLARAE PLARDAFGIG ERLDPAPWLG MRPCTPDMRP VVGPAPRHRH LWFAFGHCHH GLTLGPASGR LLAEMITGAP TYIDPHPYRP ARFG
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