Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0733 |
Symbol | |
ID | 6178860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 819753 |
End bp | 820391 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641680481 |
Product | DSBA oxidoreductase |
Protein accession | YP_001807445 |
Protein GI | 172059793 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3917] 2-hydroxychromene-2-carboxylate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0784409 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAACCG GCCTCGATAC TGCCCAACCC GCGTGGTTCT ACGACTTCGT GTCGCCGTTC TCCTACCTGC TGCTCGAACA GCTCGACAAA TGGCCGGACG TGCCGTTCGA ACCCGTCGCC GTGTCGCTGC TGGACCTGCA GCGACACTGG GGACAACGCC CGAGCGCCGA AGTACCGGCC AAGCGCGTGT TCACGTACCG CCACGCGCTG TTTCGCGCCG AACAGCTCGG CATCCGCTTC AAGATGCCGC CCGCCCATCC GTTCGATTCC GACAAGGTGC TGCGCCTCGC GCTCGCGCTG CGCGCCGATA TCGCGACCGT GCTGGAAATG TTCCGCTTCA TCTGGCACGA CGGCAACGAT CCGTCGACGC CGGACGGCTT CGCCGCGCTG TGCGAACGCG TCGGCGTGAG CCATGGCGAC GAACTGATCG AATTCGAGGA AACGAGCGCG CAGTTGCGCC GCAACACCGA CGATGCGATC GCGCTCGGCG TGTTCGGCGT CCCGACTTTC TGGATGAACC AGCAGCTGTT CTGGGGCGAG GATGCCCTGC CGATGGTGCT GTACTGCGCG CGCACGCCGA ACTGGCTCGA GTCGCGCGAG GTCAAGCGGA TCAGCACGCT GCCGAAGGGC CGCGTGTGA
|
Protein sequence | MTTGLDTAQP AWFYDFVSPF SYLLLEQLDK WPDVPFEPVA VSLLDLQRHW GQRPSAEVPA KRVFTYRHAL FRAEQLGIRF KMPPAHPFDS DKVLRLALAL RADIATVLEM FRFIWHDGND PSTPDGFAAL CERVGVSHGD ELIEFEETSA QLRRNTDDAI ALGVFGVPTF WMNQQLFWGE DALPMVLYCA RTPNWLESRE VKRISTLPKG RV
|
| |