| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0730 |
|---|
| Symbol | |
|---|
| ID | 6176241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 817536 |
|---|
| End bp | 818198 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641680478 |
|---|
| Product | xanthine dehydrogenase accessory protein XdhC |
|---|
| Protein accession | YP_001807442 |
|---|
| Protein GI | 172059790 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family |
|---|
| TIGRFAM ID | [TIGR02964] xanthine dehydrogenase accessory protein XdhC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.120832 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGAC CTGCTCCCTC GCCGCATGCC GCGTCGCATG CATCCGTCGC CGGGTGCGAC
GGCGCGTGCG GCGCATCACC CGCGCAGACG TTCCCTCAGG GCAGCGGCCG GCGCAACCGC
GCGAGCGCCG CGCCGCCGCC GATGCACATC GTGCTGTTCG GCGCGGGGCA CGTCGGCCAC
GCGCTCGTCA CGCTGCTCGG CGCGTTGCCG TGCGTCGTCC AGTGGGTCGA CACGCGCGAC
GAGCTGTTCC CGGACGAATG TCCGCCGAAC GTGCAGCCGG AGCCGACCGA CACGCCGGAG
GCCGTCGTCG ACGCGGCGCC GCCCGGCACG TACTTCCTCG TGATGACGCA CAACCACGCG
CTCGACTTCT CGCTCGCCGC GCAGATCATG CGGCGGCGCG ACTTCGCGTA CTTCGGGATG
ATCGGCTCGC GCACCAAGCG CGTGAAGTTC GAGCGCCGGC TCGCCGCGCG CGGCGTCGAT
CCGGCGCGGC TCACGGAGAT GGTGTGCCCG ATCGGCATCG CGGGCATCGT CGACAAGGCG
CCCGGTGCGA TCGCGGTGGC CGTTTGCGCG GAACTGCTGC AGGCGCGCTC GGGGACGCCG
GTGGCCGACG TGAAGGCGGC CGCGGCCGGC CGCGTGCGCG ACGACGCGAG CTGCGCGCGG
TAA
|
|---|
| Protein sequence | MNGPAPSPHA ASHASVAGCD GACGASPAQT FPQGSGRRNR ASAAPPPMHI VLFGAGHVGH
ALVTLLGALP CVVQWVDTRD ELFPDECPPN VQPEPTDTPE AVVDAAPPGT YFLVMTHNHA
LDFSLAAQIM RRRDFAYFGM IGSRTKRVKF ERRLAARGVD PARLTEMVCP IGIAGIVDKA
PGAIAVAVCA ELLQARSGTP VADVKAAAAG RVRDDASCAR
|
|---|
| |