| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0722 |
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| Symbol | |
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| ID | 6178514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 805592 |
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| End bp | 806590 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641680470 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001807434 |
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| Protein GI | 172059782 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.126824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGTGA TCCTGTTCAG CAGCCGGCAG TACGACGACG AATCGTTTAC CGCCGCCAAC
CGGCAGTTCG GCTATCGGCT GCACTTCCAG CCGTCCCATC TCGACGCGGA AACCGCGATC
CTCGCGCACG GCTATGAAGT CGTGTGTCCG TTCGTCAACG ACACCGTCGA CGCGGCCGTG
CTCGAACGGC TCGCCGACGG CGGCACGCGC CTGATCGCAC TGCGCTCGGC CGGCTTCAAC
CACGTCGACC TGGCCGCCGC CGAGCGGCTC GGCATCGCGG TCGTGCGCGT GCCGGCCTAT
TCGCCGCATG CGGTGGCCGA ACACGCGGTC GCGCTGATCC TCGCGCTCAA CCGCCGGCTG
CCGCGCGCGG TCGCGCGCAC GCGTGAAGGC GACTTCTCGC TGAACGGCCT GCTCGGCTTC
GACCTGCACG GCAAGACCGT CGGCGTGATC GGCACCGGCC TGATCGGCAG CGTGTTCGCG
AAGATCATGA TGGGTTTCGG GATGCACGTG CTCGCGCACT CGATGCCGCC GTACGACGAC
GAGCTTATCG CGTTCGGCGC GCGCTACGTC GAGCTCGACG AGCTGCTGCA CCACGCCGAC
ATCGTCAGCC TGCACTGCCC GCTGCTGCCA TCGACGCACC ATCTGATCAA CGCGCAGACG
CTCGCGCGGA TGAAGCACGG CGCGATGCTG ATCAATACGG GCCGCGGCGG CCTCGTCGAC
GCGCAGGCGC TGGTCGACGC GCTCAAGAGC GGCCAGCTCG GCCATCTCGG GCTCGACGTG
TACGAGGAGG AAAGCGGCCT CTTCTTCGAG GATCATTCCG ACCTGCCGCT GCAGGACGAC
GTGCTCGCGC GCCTGCTGAC GTTCCCGAAC GTGATCGTCA CGTCGCACCA GGCGTTCTTC
ACGCGCGAGG CGCTCGCCGA GATCGCGCAC ACGACGCTGC TGAACATCGA GGCATGGCGC
GCCGGTACGC CGACCAACGT CGTCACGGCC GGGCGCTGA
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| Protein sequence | MRVILFSSRQ YDDESFTAAN RQFGYRLHFQ PSHLDAETAI LAHGYEVVCP FVNDTVDAAV
LERLADGGTR LIALRSAGFN HVDLAAAERL GIAVVRVPAY SPHAVAEHAV ALILALNRRL
PRAVARTREG DFSLNGLLGF DLHGKTVGVI GTGLIGSVFA KIMMGFGMHV LAHSMPPYDD
ELIAFGARYV ELDELLHHAD IVSLHCPLLP STHHLINAQT LARMKHGAML INTGRGGLVD
AQALVDALKS GQLGHLGLDV YEEESGLFFE DHSDLPLQDD VLARLLTFPN VIVTSHQAFF
TREALAEIAH TTLLNIEAWR AGTPTNVVTA GR
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