Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0710 |
Symbol | |
ID | 6178223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 792901 |
End bp | 793539 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641680458 |
Product | peroxidase |
Protein accession | YP_001807422 |
Protein GI | 172059770 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0497094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTGC GTCTTGGTGA CATCGCACCG GATTTCGAGC AGGAAACGAG CCTGGGCCCG ATCAAGTTTC ATGAGTGGCT GGGCAACAGC TGGGGCGTCC TGTTCTCGCA CCCGGCCGAC TACACGCCGG TGTGCACGAC TGAGCTCGGC TTGACCTCGA AGCTGAAGGG CGAATTCGAG AAACGCAACG TGAAGGTGAT CGCGCTGTCG GTCGACGACG TCGAATCGCA CAAAGGCTGG ATCAACGACA TCAACGAGAC GCAGTCGACG GTCGTCGGTT TCCCGATCAT CGCCGACTCG GACCGCAAGG TCTCGCAACT GTACGACATG ATCCATCCGA ACGCGAACGA AACGCTGACG GTGCGCTCGC TGTTCGTGAT CGACCCGAAC AAGAAGGTGC GGCTCATCAT CACCTATCCG GCCAGCACCG GGCGCAACTT CGACGAAGTG CTGCGCGTGA TCGACTCGCT GCAACTGACC GATAATTACA AAGTCGCGAC GCCCGGCAAC TGGAAGGATG GCGACGACGT CGTGATCGTG CCGTCGCTGC AGGATCCGGA AGAACTCAAG AAACGCTTCC CGAAGGGCTT CAACGCAGTG CGTCCGTACC TGCGCCTCAC GCCGCAGCCG AACAAGTAA
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Protein sequence | MSLRLGDIAP DFEQETSLGP IKFHEWLGNS WGVLFSHPAD YTPVCTTELG LTSKLKGEFE KRNVKVIALS VDDVESHKGW INDINETQST VVGFPIIADS DRKVSQLYDM IHPNANETLT VRSLFVIDPN KKVRLIITYP ASTGRNFDEV LRVIDSLQLT DNYKVATPGN WKDGDDVVIV PSLQDPEELK KRFPKGFNAV RPYLRLTPQP NK
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