| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0692 |
|---|
| Symbol | |
|---|
| ID | 6178863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 779613 |
|---|
| End bp | 780362 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641680440 |
|---|
| Product | tol-pal system protein YbgF |
|---|
| Protein accession | YP_001807404 |
|---|
| Protein GI | 172059752 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000467208 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCACT GTGTATCCTG GCTGCGCGTT GCCGCAGCAT TCTGCGTCGT CGGCGCGGCG
TGGTCGGCCG CGCCGGCGCA CGCCGGCATG TTCGACGACA ACGAGGCGCG CCGCGCCGTG
CTCGATCTGC GCAGCAAGAG CGACAACCTG TCGAGCCAGT TGTCGGCCGC CCAGCGTACG
ATCCTCGATC AATCCGGCCG TATCGACCAG CTGAACCAGC AGGTCGCGAC GCTGCGCGGC
GAGAATGAGG ATCTGACGAA CCGGCTGACG ACGCTCGAAA GGCAGCAGAA GGAGTACTAC
CAGGATCTCG ACACGCGGCT CAAGAAGTTC GAGCCGCAAC AGGCGACGAT CGATGGTGTC
GAAGGCACCG TGCAGCCGGG TGAAACGGAT GCGCTCAGCG CGGCGCAGCA GCAGTTCCGC
AACGGCAACT TCAAGGCTGC CGCGGCATCG TTCCGCAGCT TCATCGCGAA GTATCCGCAG
AGCCCGTACC AGCCGACCGC GCAGTACTGG CTCGGCAATG CGCAATATGC GCTGCGCGAC
TATCGCGGCT CGACCGCGAC GTGGCAAGCG ATCGTGAGCA AGTATCCGCA GCATCCGCGC
GCGGCCGACG CCCTCGTCGC AATCGGTACG AACCAGCTCG AGCAAGGTCA GAAGGCGGCC
GCGAAGAAGA CGTTCGAGCA GGTCGTGTCG CAGTACGCCG GATCGAACGC TGCGCAGACC
GCGCAGGGGA AGATCGAGAG CATCAAATAA
|
|---|
| Protein sequence | MTHCVSWLRV AAAFCVVGAA WSAAPAHAGM FDDNEARRAV LDLRSKSDNL SSQLSAAQRT
ILDQSGRIDQ LNQQVATLRG ENEDLTNRLT TLERQQKEYY QDLDTRLKKF EPQQATIDGV
EGTVQPGETD ALSAAQQQFR NGNFKAAAAS FRSFIAKYPQ SPYQPTAQYW LGNAQYALRD
YRGSTATWQA IVSKYPQHPR AADALVAIGT NQLEQGQKAA AKKTFEQVVS QYAGSNAAQT
AQGKIESIK
|
|---|
| |