| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0687 |
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| Symbol | |
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| ID | 6178141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 775079 |
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| End bp | 775891 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680434 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001807399 |
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| Protein GI | 172059747 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.466338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAACC TGGAAACCGC CCAGCAATTC CTGATGACCC GCGGCCTCGA CCTCGGCCTG
AACCTCCTCG CCGCGATCGT CTTGTGGTTC ATCGGCCGCT GGGCGATCCG CCTCGGCACC
CGCCTGCTCG GCAAGGTCGT GCGCCGCAGC GGCAAGGTCG ACCCGACGCT CACCGACTAC
CTGACCTCGG TGGTCGGCGT GCTGCTGACG ATCCTGCTGA TCCTCGCGAT CCTGCAGATC
TTCGGCGTTC AGACCACGTC GTTCGCCGCA CTCCTCGCCG GCCTCGGTCT CGCGATCGGC
ACCGCCTGGG GCGGCCTGCT CGCCCACTTC GCCGCCGGCG TGTTCATGCA GGTGCTGCGT
CCGTTCAAGA TCGGCGACGT GATCAGCGCG GGCGGCGTCA CGGGCACGGT GAAGGAACTC
GGCCTGTTCG GCACGACGAT CATCACCGCC GACAACATCG TGACGATCGT CGGCAACAAC
AAGATCTTCT CGGACAACAT CGCGAACTAC AGCGCGACGC CGCATCGCCG CGTCGACCTC
ACCGCGAAGA TCGCCAACGG CGTCGATGCC GTCGACGCGA TCAACCGTCT GAAGACGCAG
ATCCAGGTGA TCCCGAACGT GCTGAAGGTG CCGGCGCCGG ACGTCGGCGT GCTGCAGTTC
ACGCCGGAAG GCCCGCTGCT GTTCGTGCGC CCGTCGACGC AGCCGGAGAA TTACTGGCAG
GTGTACTGCG ATACCAACCG CGTGATCCTC GAGACGTTCC GCGACGCGCA ATACCCGACG
CCCGAAACGC CGCTCTCGCA TCGCACCACC TGA
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| Protein sequence | MPNLETAQQF LMTRGLDLGL NLLAAIVLWF IGRWAIRLGT RLLGKVVRRS GKVDPTLTDY
LTSVVGVLLT ILLILAILQI FGVQTTSFAA LLAGLGLAIG TAWGGLLAHF AAGVFMQVLR
PFKIGDVISA GGVTGTVKEL GLFGTTIITA DNIVTIVGNN KIFSDNIANY SATPHRRVDL
TAKIANGVDA VDAINRLKTQ IQVIPNVLKV PAPDVGVLQF TPEGPLLFVR PSTQPENYWQ
VYCDTNRVIL ETFRDAQYPT PETPLSHRTT
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