Gene BamMC406_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0680 
Symbol 
ID6178150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp767688 
End bp768743 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content67% 
IMG OID641680427 
Productphosphoribosylaminoimidazole synthetase 
Protein accessionYP_001807392 
Protein GI172059740 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0150] Phosphoribosylaminoimidazole (AIR) synthetase 
TIGRFAM ID[TIGR00878] phosphoribosylaminoimidazole synthetase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCTC CGAAATCCGC TCCCGACGCT CAGGGTCTGT CCTACCGCGA CGCAGGCGTC 
GACATCGACG CGGGCGACGC GCTCATCGAC AAGATCAAGC CTTTTGCGAA GAAAACCCTG
CGCGACGGCG TGCTCGGCGG CATCGGCGGG TTCGGCGCGC TGTTCGAAGT GCCGAAGAAG
TACAAGGAGC CCGTGCTCGT GTCGGGCACC GACGGCGTGG GTACCAAGCT CAAGCTGGCG
TTTCATCTGA ACAAACACGA CACCGTCGGC CAGGATCTCG TCGCGATGAG CGTGAACGAC
ATCCTCGTGC AGGGCGCCGA GCCGCTGTTC TTCCTCGACT ACTTCGCGTG CGGCAAGCTC
GACGTCGACA CGGCCGCCAC GGTCGTCAAG GGCATCGCGC ACGGCTGCGA ACTGTCGGGC
TGCGCGCTGA TCGGCGGCGA GACGGCCGAA ATGCCGGGCA TGTACCCGGA CGGCGAATAC
GACCTGGCCG GTTTCGCGGT CGGCGCGGTC GAGAAGAGCA AGATCATCGA CGGCAGCACG
ATCGCCGAAG GCGACGTGGT GCTCGGCCTC GCATCGAGCG GCATCCACTC GAACGGCTTC
TCGCTCGTGC GCAAGATCAT CGAGCGCGCG AACCCCGACC TGTCGGCCGA TTTCCACGGC
CGCTCGCTGG CCGACACGCT GATGGCGCCG ACGCGCATCT ACGTGAAGCC GCTGCTCGCG
CTGATGCAGA AGCTGCCGGT GAAGGGCATG GCCCACATCA CCGGTGGCGG CCTCGTCGAG
AACATTCCGC GCGTGCTGCG CGAAGGCCTC ACCGCCGAGC TCGACCAGAA CGCATGGCCG
CTGCCGCCGC TGTTCAAGTG GCTGCAGGAG CACGGCGGCG TCGCCGACGC GGAAATGCAC
CGCGTGTTCA ACTGCGGGAT CGGCATGGCG GTGATCGTGT CGGCGGCGGA TGCCGACGCG
GCGATTGCCG ACCTGACGGC CGCCGGCGAA CAGGTGTGGA AGATCGGCAC CGTGCGTGCG
AGCCGCGAAG GCGAGGCGCA GACGGTCGTG GCCTGA
 
Protein sequence
MNPPKSAPDA QGLSYRDAGV DIDAGDALID KIKPFAKKTL RDGVLGGIGG FGALFEVPKK 
YKEPVLVSGT DGVGTKLKLA FHLNKHDTVG QDLVAMSVND ILVQGAEPLF FLDYFACGKL
DVDTAATVVK GIAHGCELSG CALIGGETAE MPGMYPDGEY DLAGFAVGAV EKSKIIDGST
IAEGDVVLGL ASSGIHSNGF SLVRKIIERA NPDLSADFHG RSLADTLMAP TRIYVKPLLA
LMQKLPVKGM AHITGGGLVE NIPRVLREGL TAELDQNAWP LPPLFKWLQE HGGVADAEMH
RVFNCGIGMA VIVSAADADA AIADLTAAGE QVWKIGTVRA SREGEAQTVV A