| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0671 |
|---|
| Symbol | |
|---|
| ID | 6178810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 759299 |
|---|
| End bp | 761245 |
|---|
| Gene Length | 1947 bp |
|---|
| Protein Length | 648 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641680418 |
|---|
| Product | chorismate binding-like protein |
|---|
| Protein accession | YP_001807383 |
|---|
| Protein GI | 172059731 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
[COG0147] Anthranilate/para-aminobenzoate synthases component I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.117508 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAG GCAACGAGAG CGCGTCATTC GCGCTCTTGG ACGATTGCGA CTCGACCGCG
GTTGCGCGGT CGAGTCGTTT GTATTCCGGT TTCGTGCGCG AACGCGTATG CACGGATCCG
GCGCGGCTCG ACGAAGTCGA TGCGGCGGTG GCGCAGGACC TGCGCGACGG GCTGCATGCG
GTCGTCGTCG GCGATTACGA ATTCGGACGC AATCTGGAAA GAGCGCAGCC GGGCCATGCC
CCGCTGCGCT TTTTGCTGTA TGCGCGCTGC GAGCGCCTGT CGCGCGACGA AGTCGACGCG
TGGCTCGCGC AGCAGGATGG CGGCGGCGCG CCGTCGATCG CCGGCGTCGC GCACGTCGCG
AAGAGTGTGT CGCGCGACGC GTTCGACGCG GCGATCGCCG CCGTGCACGA GGCGCTGCGC
GCGGGCGACT CGTATCAGAT CAACTACACG TACCGGCTGA ATTTCGACAT GTTCGGCACG
CCGACCGCGC TGTACCGGCG GTTGCGCGCG CGTCAGCCCG TGCGTTACGG CGCGCTGATC
GCGCTGCCTT GCGGCGTGTG GGTCGTGTCG TGCTCGCCGG AGCTGTTCGT CGAGAAGCAC
GGCGACGTGC TGCGCGCGCG GCCGATGAAG GGCACCGCGC CGCGCTCGGC CGATCCGCGT
GAAGATGCGG CGGCGGCCGC GTTCCTCGCT AACGATCCGA AGAACCGCGC GGAAAACGTG
ATGATCGTCG ACCTGCTGCG CAACGACGTG TCGCGGATCG CGCGCACGGG CACGGTCAAG
GTGCCGGCGC TGTTCTCGGT CGAGCCGTAT GCGTCGGTAT GGCAGATGAC GTCGACGGTC
GAGGCCGGCT GGCGCCACGG GACGACGTTC GCGCAGATGC TGCGCGCGCT GTTTCCATGC
GGATCGATCA CCGGTGCGCC GAAGCACAAG ACGATGGAAC TGATCGACGC GATCGAGTCG
ACGCCGCGCG GGCTCTATAC GGGCGCGATC GGCTGGCTCG ACGCGCCGAA GGACGAGGCC
GCGCAGGCAG GCGCTGTAGC GCGCGACGGC GCGGCCGGCT GCGGCGATTT CTGCCTGTCG
GTCGCGATCC GGACGCTCAC GCTCGAAGCG GTCGGCATCG ATGCTGTCGC AACGGTCGGC
GCGGGTGAGG CGGCGGCTCG CCCGGCCGGT CGGCGGCGCG GCACGATGGG GGTCGGCGCG
GGCATCGTGC TCGACAGCGT TGCCGCCGAC GAATATGCGG AGTGTGAATT GAAAGCACGA
TTCCTGACCG ACGCCGATCC GGGCTTCCAG TTGTTCGAAA CCACCGCGGC CACCCGTGCG
GACGGCGTCC GGCATCTCGA GCGCCATCTC GCGCGGCTGA AGCGCAGTGC GGATGCGTTC
GGATTCCGCT TCGATACTGA TGCGTTGCGT CGCGAGGTCG ATGCGCGCTG CGCGGCGCTC
GACGGCGATG GCCCGTACCG GATGAAGCTC GCACTTGCGA AGGACGGCGC GGTCGAGATC
ACGGCCGCGC CGCTGAAGCC GCTGCCTGCG GGGCCGGTCG GCGTGATGCT CGCGTCCGAG
CACGGCTTTG CGCCGACCCG CACGGACGAC GCGCTGCTGC TGCACAAGAC CACGCGCCGC
GCGGAATACG ACCGTGCATG GCAGGAGGCG GAAGCGCTCG GCGGCTTCGA CATGCTGTTC
ATCAACGAGC GCGGCGAGGT GACGGAAGGC GGGCGCTCGA ACCTGTTCGT GAAGCTCGAC
GGCCAGTGGG TGACGCCGCC GTTGTCGTGC GGCGTGCTGC CCGGCGTGAT GCGCGGTTTG
CTGCTCGAGG ATCCCGCCCT GGGCGCACAA GAGCGTGCGT TGACGCTCGA TGAAGTACTG
AATGCGGAGG ATCTGATGAT CTGCAATGCG TTGCGCGGGC CGATGGCAGC GCGGCTGGTC
CGCGAATCCG GCAGGTCGGA ATCGTAG
|
|---|
| Protein sequence | MTEGNESASF ALLDDCDSTA VARSSRLYSG FVRERVCTDP ARLDEVDAAV AQDLRDGLHA
VVVGDYEFGR NLERAQPGHA PLRFLLYARC ERLSRDEVDA WLAQQDGGGA PSIAGVAHVA
KSVSRDAFDA AIAAVHEALR AGDSYQINYT YRLNFDMFGT PTALYRRLRA RQPVRYGALI
ALPCGVWVVS CSPELFVEKH GDVLRARPMK GTAPRSADPR EDAAAAAFLA NDPKNRAENV
MIVDLLRNDV SRIARTGTVK VPALFSVEPY ASVWQMTSTV EAGWRHGTTF AQMLRALFPC
GSITGAPKHK TMELIDAIES TPRGLYTGAI GWLDAPKDEA AQAGAVARDG AAGCGDFCLS
VAIRTLTLEA VGIDAVATVG AGEAAARPAG RRRGTMGVGA GIVLDSVAAD EYAECELKAR
FLTDADPGFQ LFETTAATRA DGVRHLERHL ARLKRSADAF GFRFDTDALR REVDARCAAL
DGDGPYRMKL ALAKDGAVEI TAAPLKPLPA GPVGVMLASE HGFAPTRTDD ALLLHKTTRR
AEYDRAWQEA EALGGFDMLF INERGEVTEG GRSNLFVKLD GQWVTPPLSC GVLPGVMRGL
LLEDPALGAQ ERALTLDEVL NAEDLMICNA LRGPMAARLV RESGRSES
|
|---|
| |