| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0659 |
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| Symbol | |
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| ID | 6177043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 741552 |
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| End bp | 745748 |
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| Gene Length | 4197 bp |
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| Protein Length | 1398 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641680406 |
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| Product | hypothetical protein |
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| Protein accession | YP_001807371 |
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| Protein GI | 172059719 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACC GTCAGGAATC CGCCGTACCT GCGCCCGAAG CGGGACCTCC GAAGCACGAT
CATCCTGTCC TGCGTCGCGT GTTCAGGGTG ACGCTGGCAG TCGGTATCGG CACCTACTTC
GTCGCGTCCG CCTCGTTCCT CGGGCTGCGC TACGTGCTGC TGCCGCGCAT CGACGAATTC
CGCCCGCGCA TCGAGCGCGC GGTGTCCGAC AAGCTCCACG CGCAGCTTTC GATCGGCAGA
CTGTCTCCCC ACTGGTCCGG CATGCAGCCG GGCGTCGAAG TCACCGACCT GACGATTCGC
GGCCGTGATG GCCGGATCGC GCTGTCGGTC CCGCACGCGA CGGCCGCGCT GTCGTGGATG
TCGCTGCTGC GGCTGTCGCC CGCGCTGTCG AGCCTGATCG TCGACCACCC CGACCTCGTC
GTCGCGCGCG CGGCCGACGG CTCGCTGAGC GTCGCGGGCG TCGGCGTCGC GACCACCCAT
GGCGGCAACG ACACGTTCAG CACGTGGCTG CTGAAGCAGG AAGCGATCGT CCTGCGCAAC
GGCACGCTGC GCTGGCGCGA CGCGCAGCAC GACGCACCGG AACTCGCGCT GTCGGGCATT
CGCCTGGCGG TGCTCAACCA CGGCCGCGTG CACAAGGCCG CGCTGCAGGC GCCGGCGAAC
GGTACGCTGC TGCTCGGCCC GCTCGATTTC CGCGCGCGCT TCCGGCACAA GCCGCTCCAG
CCGATCGGCA AGCCGACGAA CTGGACCGGC GACGCGTACC TGTCGACCGG CCCGGTCGAC
CTGCAGACCC TCGGCCGCTA TCTCGACATT CCGCTCACGA TCCATGCGGG CCGGATCGAC
AACGCGATCT GGGCGACCTT CGAGGACGGC CACCTGCGCT CCGCGGGCGG CGACCTGCAG
GGCGCCGACG TCGTGCTGCG CGTGCGGCCG ACCCAGCCAC GCCTCGACGT GCCGACAGTC
GGGTTCGGCT GGGACATGGC GCTGAACGCC GGCCGCGACT ACACGCTGCA CCTGACGCGC
TTCAACGCGG AGCTCGGCCA GCCGCCGCTG CCGGACGGCA CGCCGCTCGC GCGCTCGCTC
GCGCTGTCGA CGCTGACCGC CCGCTACCGT GTGCCGGCCG CCGATCAGGG CCAACTGCTG
AGTGTCGTCG GCGACCGCGT CGATCTCGGC ATCCTCAGCG AGTTCATCCG CGGGCTGCCG
CTGCCGGCAC GCCTGCGCAA CGAGCTGATC AAGCTCGACC CGCGCGGGAT GGTGTCGAAC
TACCACATCG AGGTCGAACG CGCGAAGCCG GCGCGGCCCG ACCTCGCCGA CGAAGAGCGG
CGCATGGGCG CCGCGCCGAT CGTGCGCTAC CGCTTCCTCG GCGATCTGCA GGGCATCAGC
GTCGCCGCGC AGGAGCCGCC GCCGGGCTTG TCGCCGCGCG GTCACCCGCG CGCCGGCTGG
CCGGGCGTCG AGAATTTGTG GGGCCGCGTC GATGCGAACG AGACCGGCGG CAGCGCGCAC
TTCGACACGG TCAACGCCGC GGTCACGGTG CCCGGCGAAT TCGACCAGCC GCGCCTGACC
TTCGACCGGC TGCGCGGCAA CGCGAAATGG GTGATCACGC CGGCGCCGGG CGACAAGCAC
GCGCGCGTCG ACGTGACGTT GCCCGACCTG TTCGTCTCGA ACCCCGATGC CGAAATCGCG
GTGTCGGGCT CGTACACGAA CCCCGGCCAC GGCCGCGGCT CGCTCGACCT GCGCGCGGAT
TTCGCGCGCG CGTCGGTGGC GCGCATTCCG CGCTACCTGC CGACCGGGAT GTCCGAACGC
CTGCGCCAGT ATCTCGGCCA TGCGCTGCAG GACGGCCAGG TGACCAAGGG CGCGTCGATC
GTCGCGCGCG GCCCGCTCGA GAAATTCCCG TTCTCACACG AGCCGGATGC CGGCGTGTTC
CATATCGTCG CGCCATTCAC CGGCGGGCGC TTCGAGCCGA CGCCGTACCC GCCGCGCAAG
CTCGCGAACG GCACGCCGAG CGTCTGGCCG GCACTCGACG CGATCGACGG CGTGTTCGAG
CTCGCGCAGA ACAAGCTGCA CTTCGACATC GCCCGCGCGC GCTACAAGCG CGTCGCGCTG
ACCAACGTTG CCGGCCGGAT CGACGATCTC GGCAACCCGT CGAAGTCGCC GCTCATCATC
GACGGCCATG CGCAAGGCCC GCTCGCGGAC CTGATCGACT ACGCGGACAA CAGCTCGCTC
GGCACGATGA GCGGGCACAT CGGCCAGCGG ATCGACGCGC AGGGGCCCGC GGCGCTCGCG
CTCAAGATCA CGATTCCGCA GCACGTGCCG CACCCGCATA CGCACGTCGA AGGCGCCCTC
GCGTTCGGCG GCAACACGCT GTCGACCGAC GGCGTGCCGC CGCTGTCCGC GCTGCGCGGC
AGCGTGCGAT TCAGCGAGGC CGGCGCGTCG CTGCACGACC TGTCGGGGCG CTTCCTCGGC
GGCCCGGTGC GCGCGAACGG CAACTTCCAG TCGCATGGCC CGTACGCGGT GAACGTCGAC
GGCAAGCTCG CGCTCGACGC CACGCGCGGC CTGAACCTGC ACGGCACGGC CGCGGCGCTG
CTCGAGCACG TGGTCGGCGA CGCGCCGTAC CACGTCGCCG TGCGCGGCGC GCCGGGCCGC
CTGCCGGAGG TCACCGCGCA TTCCGACCTG ACGGGCGTCG CGCTGAACTT CCCCGCGCCG
TTCGCGAAAC CGGCCGGCAC GCCGATGCCG TTCCGCTTCA CGCTGCAGCC GGCCGCCGAG
GCCGACGGCA AGCGCCTCGA ACATGCCGAC CTGACGCTTG GGCCCGTGTC CGCGACCTAC
CTGCTGGACG CGACGCGCGG CCAGCCGCTG CGCGCGGTGC GCGGCGCGAT GGGCATCCAC
CGGATGCCCG ACCTGCCGCA GGACGGCGTG AGCGCGGCCG TCGACGTCGA CGAACTGGAC
GCCGACGCAT GGCTCGCGCT GGCCCGCACG CTGCAGCACG ACACCCCGCG CGCACCGGAG
CCGGCCGCGC CGCGCATCGA CGTCGCGAGC TTCACGCCGA AGCGCTTCGC GCTGCACTTC
GGCACGCTGA AGCTGCTCAA GCGCAACTGG GAAAACGTGA TCATCGGCGC GTCGCACGTC
GACGAGCTGT GGCAGGCGAA CATCGCGTCG AACCAGGTCT CGGGCTACCT GTCGTGGGCG
CAGGGCGGCG GTCACAACGG CGCGGGCGTG CTGAACGCGC GGCTCGCGAA GCTCGTGATT
CCGCAAAGCG CGCAGCACGA CCTCGTCGGC CGCGCGATGA ACCTGCCGAC GCCGACCGAC
CGGCCGATGC CGTCGGTCGA CCTGATCGTC GACCAGGTCG TCGCGCGCGA TCACGACATC
GGCCGGCTCG TCGTCAATGC GCGCAACATC GACGAGGACG GCGCGCCGGT GTGGCAGCTC
GACAAGCTCG AGCTGGCGAA CCCGGCCGCG AAGCTGACGG CGACCGGCAA CTGGCGCACC
TCGCGCCGCG CGCTGGCCCG CGGCGTCGAC GAAAACGATG CGCCGCGCCG CAGCGTGTTC
GACTTCAAGC TCGACATCGG CAACGCGGGC GCGCTGCTCG ATCTCGTCGG CCTGCCGCGC
ACGGTCGCGA ACGGCCACGG CACGGTGACC GGCAAGGTCG GCTGGCGCGG CGGCCCCACC
GCGGTCGATC TGCCGTCGCT CGGCGGCCAG GTCGCGGTCG ATCTCGAGCA CGGCCAGATC
CTGAAGGTGG ATCCGGGTGC CGCGAAACTG CTCGGCGTGC TGAGCCTGCA GAGTCTCGCG
CGCTTCCTGA CGCTGAATTT CCGCGACGTG GTCGGCAAGG GGCTGCCGTT CGACAAGATC
ACCGGCACCA GCCGGATCTC GAACGGGATC GCGCGCACCG ACGACTTCTC GATGACGACG
GCGCCGGCAA ACGTGACGGT GCGCGGTGCG GTCGACCTCG GCGCCGAGAC GCAGGACCTG
CACGCGCACG TCGCACCGAA GATCGGCGCC GGCACGGCGG CGATCGCGGC CGCGATCATC
AATCCGCTGC TCGGCGTCGG CGTGCTGGCC GCGAACTACG CGCTGTCGGA GACGCTGTCG
CACGCGTTCG CGCTCGACTA CGCGATCACG GGCTCGTGGG CGCATCCGCA CATCGAGCGG
GTGCGGGGCG ATCAGGGTAA GATGAATCAC GGTCCGGCCG ATGCGGCGAG CCATTGA
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| Protein sequence | MSDRQESAVP APEAGPPKHD HPVLRRVFRV TLAVGIGTYF VASASFLGLR YVLLPRIDEF
RPRIERAVSD KLHAQLSIGR LSPHWSGMQP GVEVTDLTIR GRDGRIALSV PHATAALSWM
SLLRLSPALS SLIVDHPDLV VARAADGSLS VAGVGVATTH GGNDTFSTWL LKQEAIVLRN
GTLRWRDAQH DAPELALSGI RLAVLNHGRV HKAALQAPAN GTLLLGPLDF RARFRHKPLQ
PIGKPTNWTG DAYLSTGPVD LQTLGRYLDI PLTIHAGRID NAIWATFEDG HLRSAGGDLQ
GADVVLRVRP TQPRLDVPTV GFGWDMALNA GRDYTLHLTR FNAELGQPPL PDGTPLARSL
ALSTLTARYR VPAADQGQLL SVVGDRVDLG ILSEFIRGLP LPARLRNELI KLDPRGMVSN
YHIEVERAKP ARPDLADEER RMGAAPIVRY RFLGDLQGIS VAAQEPPPGL SPRGHPRAGW
PGVENLWGRV DANETGGSAH FDTVNAAVTV PGEFDQPRLT FDRLRGNAKW VITPAPGDKH
ARVDVTLPDL FVSNPDAEIA VSGSYTNPGH GRGSLDLRAD FARASVARIP RYLPTGMSER
LRQYLGHALQ DGQVTKGASI VARGPLEKFP FSHEPDAGVF HIVAPFTGGR FEPTPYPPRK
LANGTPSVWP ALDAIDGVFE LAQNKLHFDI ARARYKRVAL TNVAGRIDDL GNPSKSPLII
DGHAQGPLAD LIDYADNSSL GTMSGHIGQR IDAQGPAALA LKITIPQHVP HPHTHVEGAL
AFGGNTLSTD GVPPLSALRG SVRFSEAGAS LHDLSGRFLG GPVRANGNFQ SHGPYAVNVD
GKLALDATRG LNLHGTAAAL LEHVVGDAPY HVAVRGAPGR LPEVTAHSDL TGVALNFPAP
FAKPAGTPMP FRFTLQPAAE ADGKRLEHAD LTLGPVSATY LLDATRGQPL RAVRGAMGIH
RMPDLPQDGV SAAVDVDELD ADAWLALART LQHDTPRAPE PAAPRIDVAS FTPKRFALHF
GTLKLLKRNW ENVIIGASHV DELWQANIAS NQVSGYLSWA QGGGHNGAGV LNARLAKLVI
PQSAQHDLVG RAMNLPTPTD RPMPSVDLIV DQVVARDHDI GRLVVNARNI DEDGAPVWQL
DKLELANPAA KLTATGNWRT SRRALARGVD ENDAPRRSVF DFKLDIGNAG ALLDLVGLPR
TVANGHGTVT GKVGWRGGPT AVDLPSLGGQ VAVDLEHGQI LKVDPGAAKL LGVLSLQSLA
RFLTLNFRDV VGKGLPFDKI TGTSRISNGI ARTDDFSMTT APANVTVRGA VDLGAETQDL
HAHVAPKIGA GTAAIAAAII NPLLGVGVLA ANYALSETLS HAFALDYAIT GSWAHPHIER
VRGDQGKMNH GPADAASH
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