| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0649 |
|---|
| Symbol | glcE |
|---|
| ID | 6176624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 730543 |
|---|
| End bp | 731631 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641680397 |
|---|
| Product | glycolate oxidase FAD binding subunit |
|---|
| Protein accession | YP_001807362 |
|---|
| Protein GI | 172059710 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAGG ACGACATCGT CGCCGGGTGG GCCGAGCGCA TCCGTGCCGC CAGTGCCGAC
GGCCGGCCGC TGCGGATTCG CGGCGGCGGC ACCAAGGACT GGTACGGCCA GGCGCTGGAC
GGCGAAATAC TCGACACGCG CGCGTTGCAG GGCATCGTGT CGTACGACCC GGCCGAACTC
GTCGTCACGG TCCGCGCGGG CACGCCGCTC GCGCAGCTTG AAACCGCCCT CACCGAGTGC
GGCCAGATGC TGCCGTTCGA GCCGCCGCAC TTCGGCCGCA CGGCTACCGT CGGCGGCTGC
ATCGCGGCCG GCCTCGCGGG CCCGCGCCGC GCGACCTGCG GCGCGCCGCG CGATTTCGTG
CTCGGCGTCA CGCTGATGAA CGGGCGCGGC GAGCTGCTGC GCTTCGGCGG TCAGGTCGTG
AAGAACGTCG CCGGCTACGA CGTGTCGCGG CTGATGGCCG GCTCGCTTGG CACGCTCGGT
CTGATGCTGG AGCTGTCGAT CAAGGTGCTA CCGGTGCCGG TCGCCGAAGT CACGCTGAAG
TTCGAGATGA CCGCGACCGA CGCGGTGCGC AAGCTCAACG AATGGGGCGG CCATCCGCTG
CCCGTCAGCG GGAGCGCGTG GCGCAACGGC ACGCTGGTGC TGCGGCTGTC TGGCGCCGAG
GCCGCCGTGA AATCGGCGAA GACGCTGCTC GGCGGCGAAG TCGTCGACGC GGTCGAGGCC
GAGCGCTTCT GGGCCGGCCT GCGCGAGCAT GCCGATCCGT TCTTCAACGG CATCCCGCCC
GGCTATGCGC TATGGCGCCT CGCACTGCCG TCGATCACCG AGCCGATGCA CCTGCCCGGC
ACCCAGCTGA TGGAATGGGG CGGCGCGCAG CGCTGGTGGA TCACCGACGC CGATGCGCAA
ACGGTGCGCA TGAGCGCGAA GCAGGCCGGC GGCCATGCGA CGCTGTTCCG CGCGGGCGAC
TCGTACGACC GCAGCGCGGG CGTGTTCACG CCGCTGCCCG CGCCGCTGAT GAAGATTCAC
CGCGGGCTGA AGGCTGCGTT CGATCCCGCA CGCATCTTCA ACCGCGGCCG GCTCTACCCC
GAGCTTTAG
|
|---|
| Protein sequence | MEEDDIVAGW AERIRAASAD GRPLRIRGGG TKDWYGQALD GEILDTRALQ GIVSYDPAEL
VVTVRAGTPL AQLETALTEC GQMLPFEPPH FGRTATVGGC IAAGLAGPRR ATCGAPRDFV
LGVTLMNGRG ELLRFGGQVV KNVAGYDVSR LMAGSLGTLG LMLELSIKVL PVPVAEVTLK
FEMTATDAVR KLNEWGGHPL PVSGSAWRNG TLVLRLSGAE AAVKSAKTLL GGEVVDAVEA
ERFWAGLREH ADPFFNGIPP GYALWRLALP SITEPMHLPG TQLMEWGGAQ RWWITDADAQ
TVRMSAKQAG GHATLFRAGD SYDRSAGVFT PLPAPLMKIH RGLKAAFDPA RIFNRGRLYP
EL
|
|---|
| |