Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0640 |
Symbol | |
ID | 6177862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 721624 |
End bp | 722583 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641680388 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001807353 |
Protein GI | 172059701 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGA CTGAACTGAA ATACATCGTC GCGGTCGCGC GCGAGCGGCA TTTCGGTCGC GCCGCCGAAG CCTGCTTCGT GAGCCAGCCG ACCCTCTCGG TGGCGATCAA GAAGCTGGAA GACGAGCTCA ACGTGCAGAT TTTCGAGCGC GGCGCGAGCG AAGTGAGCGT GACCCCGATC GGCGACCAGA TCGTCACGCA GGCGCAGCGC GTGCTCGAGC AGACCTTCGC GATCAAGGAG ATCGCGAAGC AGGGCAAGGA CCCGCTCGTC GGCCCGTTCC GTCTCGGCGT GATCTACACG ATCGGGCCGT ACCTGCTGCC GACGCTCGTC AAGCAGATGA TCCAGCGGGT GCCGCAGATG CCGCTGATGC TGCAGGAGAA CTACACGCTG AAGCTGCTCG AACTGCTGAA GCAGGGCGAG ATCGACGCCG CGATCATGGC GCTCCCGTTT CCCGAAACCG GCCTGATGGT GCGGCCGCTG TACGACGAGC CGTTCGTCGT CGCGCTGCCG GCCGGCCATC CGTGGGAGAA GCGCGACGAG ATCGACGCCG AGGACCTGAA ACAGGAAACC ATGCTGCTGC TCGGCAACGG CCACTGCTTC CGCGATCACG TGCTCGGCGT GTGCCCGGAA CTGATGCGCT TCTCGCAAAC AGCCGACGGC ATCCAGAAGA CCTTCGAGGG CTCGTCGCTC GAAACGATTC GCCACATGGT CGCGAGCGGG GTCGGCATCA CGGTGCTGCC GCGGATGTCG GTCGCCGAGA TCGGCCCGCG CGCGAATGGC CCCGACGCCG AACTGCTGTC GTACGTGCCG TTCAACGAAC CGGTGCCCGA TCGCCGCGTC GTGCTGGTGT GGCGCAAGAG CTTCACGCGA ATGCCGGCGA TCGACGCGAT CAGCGACGCG ATCGCCGCGT GCGACCTGCC GGGCGTCGCA AAGCTCGACA TGCCGGCGAC GATGAACTGA
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Protein sequence | MTLTELKYIV AVARERHFGR AAEACFVSQP TLSVAIKKLE DELNVQIFER GASEVSVTPI GDQIVTQAQR VLEQTFAIKE IAKQGKDPLV GPFRLGVIYT IGPYLLPTLV KQMIQRVPQM PLMLQENYTL KLLELLKQGE IDAAIMALPF PETGLMVRPL YDEPFVVALP AGHPWEKRDE IDAEDLKQET MLLLGNGHCF RDHVLGVCPE LMRFSQTADG IQKTFEGSSL ETIRHMVASG VGITVLPRMS VAEIGPRANG PDAELLSYVP FNEPVPDRRV VLVWRKSFTR MPAIDAISDA IAACDLPGVA KLDMPATMN
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