| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0630 |
|---|
| Symbol | |
|---|
| ID | 6178033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 708636 |
|---|
| End bp | 709196 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641680378 |
|---|
| Product | YceI family protein |
|---|
| Protein accession | YP_001807343 |
|---|
| Protein GI | 172059691 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2353] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTGT CTTTCTCCCG CTCCATGCTG ACCGCGTTCG CCGCGGCGGC ACTTGTCGCG
TCGGGCGCGG CGCATGCCGA CGTCGATCTC GCGAAGAGCA AGGTGTCCGC GGTGTCCAAG
CAGATGAACG TGCCGACCGA AGGCGCATTC AAGAAATTCT CCGCGCAGGT GAAGTTCGAC
CCGGCGAAGG CCGCGCAGGG CAGCGCGCAG ATGTCGATCG ACATCGCGAG CTTCGACCTC
GGCGACAAGA TGTACAACGA CCAGGTCGCC GGCAAGGACT GGTTCGACGC GAAGATGTAT
CCGCAGGCGA CCTTCGCGTC GTCGGCGATC GCGCCGGCGG GCGGCAACAA GTACAACGTG
ACCGGCAAGC TGACGATCAA GGGCAAGTCC GAGACCGTCA CCGTACCCGT CACGGTCACG
CAGAGCGGCG CGACGCAGAC CTTCGACGGC GTGCTGCCGA TCAAGCGTTC GGCGTTCAAC
GTCGGCACCG GCGAGTGGAA GGACACGTCG ATCGTCGCCG ACGAAGTACA GATCAAGTTC
CATCTCGTCG CCACGAAGTA A
|
|---|
| Protein sequence | MKVSFSRSML TAFAAAALVA SGAAHADVDL AKSKVSAVSK QMNVPTEGAF KKFSAQVKFD
PAKAAQGSAQ MSIDIASFDL GDKMYNDQVA GKDWFDAKMY PQATFASSAI APAGGNKYNV
TGKLTIKGKS ETVTVPVTVT QSGATQTFDG VLPIKRSAFN VGTGEWKDTS IVADEVQIKF
HLVATK
|
|---|
| |