Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0628 |
Symbol | |
ID | 6176599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 707146 |
End bp | 707808 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641680376 |
Product | paraquat-inducible protein A |
Protein accession | YP_001807341 |
Protein GI | 172059689 |
COG category | [S] Function unknown |
COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACGAT ACGACCTGAT TGCCTGCCAC GAATGCGACG CACTGTTGCA TAAACCGCGC CTGAGCGGTC GCGAAATCGC GCGCTGCCCG CGCTGCGACG CGCTGCTCTA CCGCAACAGC ACCACGCAGA TCGAGCGCAT CAGCGCGCTC GCGGTCGCGG CTCTGGTCAC GTTCGTCATC GCGCAGACCT TCCCGATCCT CGAGATGGAC CTGAACGGTA CGCGCGTGCA GACGACCTTG CTCGGCGCGA TCGAGTCGCT GTGGCACCAG GGCATGGAAG TCGTCGGCGT CATGGTGTTC TGCTCGACCG TGCTGTTCCC GCTCGTCGAG ATGGCCGCGC TGCTTTACGT GCTGCTGCCG ATCCGCCGCG GCGTCGTGCC GCCGGGCCTC AACCTGGTGC TGCGCACGAT CCAGCTCGTG CGGCCGTGGG GGATGATCGA GGTACTCATG CTCGGCATCG TCGTGACGAT CGTGAAGATG GTGAGCCTCG CGCGCGTCGT GCCCGACGCC GCGCTGTTCG CGTTCGGCGC GCTCACGCTG ATGACGGCCG TCGTGCTGAT GTTCGATCCG CGCACGCTGT GGGACATCGC CGACGACCTG CGCGCCGGCC GCGCGCCCGG GCAGCCCGAC GGCGCCGCGC CGCCGCAAGA CCCCCGCCGA TGA
|
Protein sequence | MQRYDLIACH ECDALLHKPR LSGREIARCP RCDALLYRNS TTQIERISAL AVAALVTFVI AQTFPILEMD LNGTRVQTTL LGAIESLWHQ GMEVVGVMVF CSTVLFPLVE MAALLYVLLP IRRGVVPPGL NLVLRTIQLV RPWGMIEVLM LGIVVTIVKM VSLARVVPDA ALFAFGALTL MTAVVLMFDP RTLWDIADDL RAGRAPGQPD GAAPPQDPRR
|
| |