| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0617 |
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| Symbol | mnmA |
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| ID | 6178164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 694665 |
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| End bp | 695834 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641680365 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001807330 |
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| Protein GI | 172059678 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.452305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.496257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGC GCCGTGTAGT AGTGGGCATG TCGGGCGGCG TCGATTCGTC GGTGACCGCG
TGGCTGCTCA AGGAACAAGG GTACGACGTG GTCGGCCTGT TCATGAAGAA CTGGGAAGAC
GACGACGACG GCGAATACTG TTCGACGCGC CAGGACTGGA TCGACGTCGT GTCGGTCGCC
GACCTGATCG GCATCGACGT GGAAGCCGTG AATTTCGCGG CCGAGTACAA GGATCGCGTG
TTCGCCGAAT TCCTGCGCGA ATACTCGGCC GGCCGCACGC CGAACCCCGA CGTTCTGTGC
AACGCCGAGA TCAAGTTCAA GGCGTTCCTC GATCACGCGA TGTCGCTCGA CGCGGAAATG
ATCGCGACCG GCCACTACGC GCGCGTGCGC GAGCGCGACG GTCGCTTCGA ACTACTGAAG
GCGTTCGATC ATACGAAAGA CCAGTCGTAC TTCCTGCACC GGCTGAACCA GGCGCAACTG
TCGAAGACGA TGTTCCCGCT CGGCGAGATC CCGAAGACGA AGGTGCGCGA GATCGCCGCG
CAGATCGGCC TGCCGAACGC GAAGAAGAAG GACTCGACGG GCATCTGCTT CATCGGCGAA
CGGCCGTTCC GCGACTTCCT GAACCGCTAT CTTCCGACGA AACCGGGCCC GATGAAGACG
CCGGACGGCA AGGTGATCGG CGAGCACATC GGCCTCGCGT TCTACACGTT CGGCCAGCGC
AAGGGCATCG GCCTCGGCGG CAGCAAGGAC GGCAGCGGCG AACCGTGGTT CGTCGCCGCG
AAGGACATCG CGTCGAACAC GCTGTACGTC GTGCAGGGCC ACGACCATCC GTGGCTGCTG
TCGCGTCAGC TCGTCGCCGG CAACGTGAGC TGGGTCGCGG GCGAGCCGCC GGCCGACGGC
TTCTCGTGCG GCGCCAAGAC GCGCTACCGG CAGGCGGACG CCGCGTGCTC GTTCGGCCGG
CCCGCGCTCG GCCGGGCCGA CGGCGAGCGC TTCTCGCTCA CGTTCGACGA CGCGCAATGG
GCGGTGACGC CCGGCCAGTC GGCCGTGCTG TACGACGGCG AGATCTGCCT GGGCGGCGGC
ATCATCGAGT TCGCGGCTAC CGGCCAGCCC GGCCAGACGG CGCCGGCAGC GGCGGCAGGC
CACGCGGGCG CGCTGGCCGA AGCACGCTGA
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| Protein sequence | MTKRRVVVGM SGGVDSSVTA WLLKEQGYDV VGLFMKNWED DDDGEYCSTR QDWIDVVSVA
DLIGIDVEAV NFAAEYKDRV FAEFLREYSA GRTPNPDVLC NAEIKFKAFL DHAMSLDAEM
IATGHYARVR ERDGRFELLK AFDHTKDQSY FLHRLNQAQL SKTMFPLGEI PKTKVREIAA
QIGLPNAKKK DSTGICFIGE RPFRDFLNRY LPTKPGPMKT PDGKVIGEHI GLAFYTFGQR
KGIGLGGSKD GSGEPWFVAA KDIASNTLYV VQGHDHPWLL SRQLVAGNVS WVAGEPPADG
FSCGAKTRYR QADAACSFGR PALGRADGER FSLTFDDAQW AVTPGQSAVL YDGEICLGGG
IIEFAATGQP GQTAPAAAAG HAGALAEAR
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