| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0614 |
|---|
| Symbol | |
|---|
| ID | 6177049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 690634 |
|---|
| End bp | 692028 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641680362 |
|---|
| Product | peptidase M24 |
|---|
| Protein accession | YP_001807327 |
|---|
| Protein GI | 172059675 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0006] Xaa-Pro aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.178264 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCGC CCCTCGATAC CGCCATCGCC GTCGACGTCT ACCGCCAGCG CCGTGAACGC
GTGCTTGCCG CACTGCGCGC CGCGGGCGGC GGCGTCGCCA TCGTCCCCAC CGCGCCGGAA
ATGCTGCGCA ACCGCGATAC GGCCTTTCCG TACCGGCATG ACAGCTACTT CCATTACCTG
ACGGGCTTCA CCGAGCCGGA CGCCGTGCTC GTGCTGAACG CGGCCGGGCA CGGCGCGCCG
GAGTCGATCC TGTTCTGCCG CGCGAAGAAT GCCGACCGTG AGATCTGGGA AGGTTTCCAT
TACGGGCCAG AGGCCGCGCG CGATGCGTTC GGTTTCGACA CGGCCTACGC GGTCGACGTG
ATCGACACCG AAATGCCGCG GCTGCTCGCC GATGCGGGCA CCGTGCACTA CCGGTTCGGC
GCATCGACCG AGTTCGACCG CCAGCTCGCC GGCTGGATCG ATGCGGTGCG CGCGCAGGCG
CGCGCCGGTG TCGCCGCGCC GGACGCGATG CTCGACCTCA CGCCGCTGCT CGACGACATG
CGGCTCGTGA AGGACGAACA CGAGCTCGCG ATCATGATGC GCGCCGCGCA CATCTCCGCG
CTCGCGCATC GCCGCGCGAT GCAGGCGTGC CGCCCGGGGA TCCGCGAATA CGAACTCGAG
GCCGAGCTGC TCTATACGTT CCGCAAGCAC GGCGCGCAGG CGCCCGCGTA CGGCTCGATC
GTCGCGGCCG GCGCGAATGC GTGCGTGCTG CACTACCCGG CCGGCAACGC GGCCGCGCAG
GACGGCGACC TGATCCTGAT CGATGCCGCG TGCGAACTCG ACGGCTACGC GTCGGACATC
ACGCGCACGT TCCCGGCCAA CGGGCGCTTC TCGCCCGCGC AGCGCACGCT GTACGACATC
GTGCTCGCCG CGCAGCAGGC CGCGATCGAC GCGACGCGCG CAGGCGTGCC GTTCGAGGCG
CCGCACGACG CAGCCGTGCG CGTGCTCGCG CAGGGCCTGC TCGATACCGG CATCATCCCG
AAGACACGCT TCGCGAGCGT CGACGACGTG ATCGCCGAGC GCGCGTACGC ACGCTTCTAC
ATGCACCGCA CCGGCCACTG GATCGGCATG GACGTGCACG ATTGCGGCGA CTACCGCGAG
CGGCTCGCCG AGCGCGACGC CAACGGCGCG CTGCCATGGC GCACGCTGAA ACCCGGGATG
ACGCTCACCG TCGAGCCGGG CCTGTACGTG CGGGCCGCCG AAGACGTGCC GTCCGAATAC
TGGAACATCG GCATCCGCAT CGAAGACGAC GCGATCGTGC GCGAGCACGG TTGCGAGCTG
ATCACGCGCG ACGTGCCGGT GGCGGCCGCC GAGATCGAGG CGCTGATGCG CGCGGGCGCG
GCGCACGCCG CCTGA
|
|---|
| Protein sequence | MNAPLDTAIA VDVYRQRRER VLAALRAAGG GVAIVPTAPE MLRNRDTAFP YRHDSYFHYL
TGFTEPDAVL VLNAAGHGAP ESILFCRAKN ADREIWEGFH YGPEAARDAF GFDTAYAVDV
IDTEMPRLLA DAGTVHYRFG ASTEFDRQLA GWIDAVRAQA RAGVAAPDAM LDLTPLLDDM
RLVKDEHELA IMMRAAHISA LAHRRAMQAC RPGIREYELE AELLYTFRKH GAQAPAYGSI
VAAGANACVL HYPAGNAAAQ DGDLILIDAA CELDGYASDI TRTFPANGRF SPAQRTLYDI
VLAAQQAAID ATRAGVPFEA PHDAAVRVLA QGLLDTGIIP KTRFASVDDV IAERAYARFY
MHRTGHWIGM DVHDCGDYRE RLAERDANGA LPWRTLKPGM TLTVEPGLYV RAAEDVPSEY
WNIGIRIEDD AIVREHGCEL ITRDVPVAAA EIEALMRAGA AHAA
|
|---|
| |