| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0612 |
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| Symbol | |
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| ID | 6177741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 688160 |
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| End bp | 689227 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680360 |
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| Product | NifR3 family TIM-barrel protein |
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| Protein accession | YP_001807325 |
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| Protein GI | 172059673 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.170389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTTA TCGGCTCTCA CGTTTTGCGT AACAACCTGT TCGTCGCGCC GATGGCCGGC
GTGACGGATC GTCCGTTCCG CCAGCTGTGC AAGCGGCTGG GGGCCGGGTA CGCGGTGTCC
GAGATGGTCG CGTCCAATGC GCAGCTGTGG AAAAGCGCGA AGACGATGCG GCGTGCCAAC
CACGAAGGCG AAGTCGAGCC GATCGCGGTG CAGATCGCCG GCGCCGATCC CGCGATGATG
GCCGAAGCGG CCCGCTACAA CGTCGACAAC GGCGCGCAGA TCATCGACAT CAACATGGGC
TGCCCGGCGA AGAAGGTCTG CAACGTCGCG GCCGGCTCCG CGCTGCTGCA GAACGAGCCG
CTCGTGCAGC GGATCGTCGA GGCCGTGGTC GCGGCGGTCG GCACGGGGCC GGATGCGGTT
CCCGTCACGC TGAAGATCCG CACCGGCTGG GATCGCGAGC ACAAGAACGC GATCACGGTC
GCGCGCCTCG CCGAAGCGGC CGGCATCTCG ATGCTGACCG TGCACGGCCG CACGCGTGCC
GACCTCTACC GCGGCGACGC GGAATACGAC ACCATCGCGG CCGTGAAGGC GGCCGTGCGC
ATCCCGGTCG TCGCGAACGG CGACATCACG TCGCCGGCGA AAGCGAAGGC CGTGCTCGAC
GCAACCGGCG CCGACGCGCT GATGATCGGT CGCGCGGCGC AAGGCCGGCC GTGGCTGTTC
CGTGAAATCG ATCATTTCCT GCAAACCGGC GAGCTGCTGC CCCCGCCGCG GATCGACGAG
ATCCAGCACG TGATGAACGA ACACCTGGAA GACCACTACG CGTTCTACGG TGAATTCACC
GGAGTCCGTA CTGCGCGCAA GCACATCGGC TGGTACACTC GCGGCCTTTC CGGTGCCAAC
GGGTTCCGGC ACAGGATGAA CACGCTCGAT TCCACCCGCG AGCAGCTCGC CGCCGTCAAT
GCATTCTTCG AGGCGCAAAA GGCGCTGTCG GACCACCTCG TCTACGTCGA TGACGAAGAG
GAAAACGGCC AGCGCGAGTC GGACGACCAT AACCAGTTAG CAGCATGA
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| Protein sequence | MPVIGSHVLR NNLFVAPMAG VTDRPFRQLC KRLGAGYAVS EMVASNAQLW KSAKTMRRAN
HEGEVEPIAV QIAGADPAMM AEAARYNVDN GAQIIDINMG CPAKKVCNVA AGSALLQNEP
LVQRIVEAVV AAVGTGPDAV PVTLKIRTGW DREHKNAITV ARLAEAAGIS MLTVHGRTRA
DLYRGDAEYD TIAAVKAAVR IPVVANGDIT SPAKAKAVLD ATGADALMIG RAAQGRPWLF
REIDHFLQTG ELLPPPRIDE IQHVMNEHLE DHYAFYGEFT GVRTARKHIG WYTRGLSGAN
GFRHRMNTLD STREQLAAVN AFFEAQKALS DHLVYVDDEE ENGQRESDDH NQLAA
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