Gene BamMC406_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0601 
Symbol 
ID6176564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp678429 
End bp678800 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content60% 
IMG OID641680349 
Productiron-sulfur cluster insertion protein ErpA 
Protein accessionYP_001807314 
Protein GI172059662 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00222893 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.443525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTG TTACCGAATC CGCAGCAACG ACGGCCGAAA TGCCGGTACC GTTCGTCTTC 
ACCGACGCCG CGGCCGACAA GGTCAAGCAA CTGATCGACG AAGAGGGCAA TCCCGACCTG
AAGCTGCGCG TGTTCGTGCA GGGTGGCGGC TGCTCGGGCT TCCAGTATGG CTTCACGTTC
GACGAGGAAG TCAACGAGGA CGACACCGTG ATGAACAAGA ACGGCGTCCA GCTCCTGATC
GACTCGATGA GCTACCAGTA TCTGGTCGGC GCCGAGATCG ACTACAAGGA CGACCTCAAC
GGCGCCCAGT TCGTGATCAA GAACCCGAAC GCCACGACCA CCTGCGGGTG CGGCTCGTCG
TTCTCGGTCT GA
 
Protein sequence
MNAVTESAAT TAEMPVPFVF TDAAADKVKQ LIDEEGNPDL KLRVFVQGGG CSGFQYGFTF 
DEEVNEDDTV MNKNGVQLLI DSMSYQYLVG AEIDYKDDLN GAQFVIKNPN ATTTCGCGSS
FSV