| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0599 |
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| Symbol | rplM |
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| ID | 6178819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 677290 |
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| End bp | 677820 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641680347 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_001807312 |
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| Protein GI | 172059660 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000510805 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.599528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCACGG AAAAAGAACA GGGAGAGCCT GCACCGCGCC TCGAAGCGCA CACAGACAAG
CAGGAAGAAC ACATCGGGCA AAGCATTTTT TTTGGATCGA TCATGAAGAC GTTTTCCGCA
AAAGCCCATG AGGTGACGCG CGAATGGTAC GTGATTGACG CGACGGATAA GGTTCTCGGC
CGTGTTGCCA GCGAAGTGGC ACGCCGTCTG CGCGGCAAGC ACAAGCCTGA GTTCACCCCG
CACGTCGACA CTGGTGATTT CATCATCATC ATCAACGCGA GCAAGTTGAA GGTCACGGGC
AACAAGACTC TCGACAAGAA GTACTACCGT CACTCGGGCT ACCCGGGCGG TATCTATGAA
ACGACGTTCG GCAAGATGCA GGAACGCTTC CCGGGCCGCG CGCTCGAGAA AGCGGTCAAG
GGCATGCTGC CGAAGGGCCC GCTCGGCTAC GCAATGATCA AGAAGCTGAA GGTCTACGCT
GAAGCCACGC ATCCGCATTC GGCGCAACAG CCGAAGGCGC TCGAGATCTA A
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| Protein sequence | MPTEKEQGEP APRLEAHTDK QEEHIGQSIF FGSIMKTFSA KAHEVTREWY VIDATDKVLG
RVASEVARRL RGKHKPEFTP HVDTGDFIII INASKLKVTG NKTLDKKYYR HSGYPGGIYE
TTFGKMQERF PGRALEKAVK GMLPKGPLGY AMIKKLKVYA EATHPHSAQQ PKALEI
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