| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0577 |
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| Symbol | holA |
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| ID | 6177963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 648266 |
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| End bp | 649360 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641680325 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_001807290 |
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| Protein GI | 172059638 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.89546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTGC GACTTGATGC GCTGGAGCCG CACCTCGCGA AGGGGATGGC CGGGCTCTAC
ACCGTCTACG GCGACGAGCC GCTGCTCGCG CAGGAAGCGT GCGACCGCAT TCGTGCGGCC
GCGCGCGCGG CCGGCTTCAC CGAGCGTTCG GTGCATACGG TCGAGCGCGG CTTCGACTGG
AGCGTGCTGC TCGGCGCGAC CCAGGCAATG TCGCTGTTCG GCGAGCGCCA ACTGATCGAG
CTGCGCATTC CATCGGGCAA GCCCGGCAAG GAAGGCGCGG ACGCGCTGAA GACGCTCGCG
GCGACCCCCA ACCCCGACGC GCTGATGCTC GTGACGTTGC CGCGCCTCGA TGCGGCAACG
CAGAAATCCG CGTGGTTTGC CGCGCTGCAG AACGGGGGCG TCGCGCTGAA GATCGATCCG
GTCGAGCGCG CGCAGCTGCC GAACTGGATC GGCCAGCGTC TGTCGATGCA GGGCCAGCGC
GTCGCGCCCG GCGACGACGG GCGGCGCGCG CTGCAGTTCA TCGCGGAGCG CGTCGAGGGC
AACCTGCTCG CCGCGCATCA GGAAATCCAG AAGCTCGGGC TGCTCTATCC GCAGGGCGTG
CTGTCGTTCG AGCAGGTGCA CGACGCGGTG CTGAACGTCG CGCGCTACGA CGTGTTCAAG
CTGAACGAGG CGATGCTCGC GGGTGACGCC GCGCGGCTCG CGCGGATGAT CGACGGGCTG
AAGGGCGAGG GCGAGGCGAT CGTGCTCGTG ATGTGGGCCG TCGTCGAGGA ATTGCGCACG
CTGCTGCGGA TCAAGCGCGG CACGACGGCC GGCAAGCCGC TCGCTACGCT GCTGCGCGAG
AACCGCGTGT GGGGCCCGCG CGAGCGACTG ATCGGCCCCG CGCTGAACCG CGTGTCGGAA
CCCGTGCTCG AGAAGGCGCT CGCGTTTGCC GCGAAGCTCG ACCGGCAGGT GAAGGGGCTG
TCGGCGATCA CGCCGGGCCG CCGCTCGCAG GACGATCCGC CGCCCGACCC GTGGGACGGC
CTGTTCCAGC TCGCGATGAC TGTGGCGGGC GCCCGCGGCG AGCGACCGCC GCCCGCGGGT
CGCGTGCGGC GTTAA
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| Protein sequence | MQLRLDALEP HLAKGMAGLY TVYGDEPLLA QEACDRIRAA ARAAGFTERS VHTVERGFDW
SVLLGATQAM SLFGERQLIE LRIPSGKPGK EGADALKTLA ATPNPDALML VTLPRLDAAT
QKSAWFAALQ NGGVALKIDP VERAQLPNWI GQRLSMQGQR VAPGDDGRRA LQFIAERVEG
NLLAAHQEIQ KLGLLYPQGV LSFEQVHDAV LNVARYDVFK LNEAMLAGDA ARLARMIDGL
KGEGEAIVLV MWAVVEELRT LLRIKRGTTA GKPLATLLRE NRVWGPRERL IGPALNRVSE
PVLEKALAFA AKLDRQVKGL SAITPGRRSQ DDPPPDPWDG LFQLAMTVAG ARGERPPPAG
RVRR
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