| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0569 |
|---|
| Symbol | |
|---|
| ID | 6177838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 640662 |
|---|
| End bp | 641186 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641680317 |
|---|
| Product | ureidoglycolate hydrolase |
|---|
| Protein accession | YP_001807282 |
|---|
| Protein GI | 172059630 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG3194] Ureidoglycolate hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.255411 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGAC CCCATATCCT GCGCGTCGAG CGCCTGACCC GCGAAGCGTT CGCGCCGTTC
GGCGACGTGA TCGCGCTCGA AGGCGCGCGG CATTTCCCGA TCAACGGCGG CACGACCGAG
CGCTTTCACG ATCTCGCGAC GATCGACGTC TGCGCCGACG GCGGCCGGCC GCTCGTCAGC
GTGTTTCGTG CGCAGCCGCG CGCGCTGCCG GTCGCGATCA CGCTGATGGA GCGCCATCCG
CACGGCAGCC AGGCGTTCAT TCCGCTCGCG GCCGTGTCGC GCTATGCGAT CGTCGTCGCG
CCGGCCGGCG AGTTCCGGCC CGACGCGATG CGCGCGTTCC TGGCCGAAGG CTGGCAGGGC
GTGAATTACG CGAAGGGCGT CTGGCACCAT CCGCTGCTCG CGCTCGACGC GGTCAGCGAC
TTCGTGATCG TCGACCGCGG CGGCCCGCAG CCGAACTGCG ACGAGATTCC GCTCGACGAC
GCATGGGCGC TCGAGTTCGA GCCGGCCTGC GCGAGCGCGA CCTGA
|
|---|
| Protein sequence | MSGPHILRVE RLTREAFAPF GDVIALEGAR HFPINGGTTE RFHDLATIDV CADGGRPLVS
VFRAQPRALP VAITLMERHP HGSQAFIPLA AVSRYAIVVA PAGEFRPDAM RAFLAEGWQG
VNYAKGVWHH PLLALDAVSD FVIVDRGGPQ PNCDEIPLDD AWALEFEPAC ASAT
|
|---|
| |