| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0562 |
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| Symbol | |
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| ID | 6177740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 632544 |
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| End bp | 634616 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641680310 |
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| Product | transketolase |
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| Protein accession | YP_001807275 |
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| Protein GI | 172059623 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.32365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCGT GCCCCCGTTT TCTCGACTCG TTCTCCGGAC TCGACATGAC GACTTCGTCT
CCCGCCTCTA CCACTCTGAT GGCCAACGCG ATCCGTGCGC TCGCGATGGA CGCCGTCCAG
CAAGCGAACT CCGGCCACCC CGGCATGCCG ATGGGCATGG CCGAAATCGG CGTTGCGCTC
TGGTCGCGCC ACCTGAAGCA CAACCCGACG AACCCGCACT GGGCAGACCG CGACCGTTTC
GTGCTGTCGA ACGGCCACGG CTCGATGCTG CTGTACTCGC TGCTGCACCT GACCGGCTAC
GACCTGCCGA TCGAAGAGCT GAAGAACTTC CGCCAGCTGC ACTCGAAGAC GCCGGGCCAC
CCGGAATACG GCATCACGCC GGGCGTCGAG ACGACCACCG GCCCGCTCGG CCAGGGTCTC
GCGAACGCGG TCGGCATGGC GCTCGGCGAA GCGCTGATGG CCGACGAGTT CAACCGTGAC
GGCGCGAAGA TCGTCGATCA CCACACGTAC GTGTTCCTCG GCGACGGCTG CCTGATGGAA
GGCATCTCGC ACGAAGCCTG CTCGCTCGCG GGCACGCTGA AGCTGAACAA GCTGATCGCG
CTGTACGACG ACAACGGCAT CTCGATCGAC GGCGACGTCG TCAACTGGTT CCACGACGAC
ACGCCGAAGC GCTTCGAGGC ATACGGCTGG AACGTGATCC CGAACGTGAA CGGCCACGAC
GTCGACGCGG TCGACGCGGC CATCGCGAAG GCGAAGCTGT CGGACAAGCC GACGCTGATC
TGCTGCAAGA CGGTGATCGG CAAGGGCGCG GCGACCAAGG CCGGCGGCCA CGACGTGCAC
GGCGCGGCGC TCGGCGCGGA AGAAATCGCG AAGACGCGCG AAGCGCTCGG CTGGAAGTGG
GAGCCGTTCG TGATTCCGCA GGAAGTCTAT GCGGCGTGGG ATGCGAAGGA AGCCGGCAAG
CGTGCCGAGA CCGAATGGGA CGCGACGTTC GCGCAATATC GCGAGAAATT CCCGGCGCAA
GCCGCCGAAT TCGAGCGCCG GATGGCCAAC CAGCTGCCGG CCGACTGGGC CGAGAAGGCC
GCGGCGATCA TCGCCGGCGC GAACGAGCGT GCCGAGACGG TCGCGACCCG CAAGGCGTCG
CAACAGGCCA TCGAAGGGCT CGCCGCCGTA CTGCCGGAAC TGCTCGGCGG CTCGGCCGAC
CTGACCGGCT CGAACCTGAC CAACTGGAAG GCATCGAAGG CGGTGCGCGC GAATCCGGAA
GGCGCGGGCG TGCTGCTCGG CAACCACATC AACTACGGCG TGCGCGAATT CGGCATGAGC
GCTGCGCTCA ACGGCCTCGC GCTGCACGGC GGCCACAAGC CGTTCGGCGG CACGTTCCTG
ACGTTCTCCG ACTACAGCCG CAACGCGCTG CGCGTCGCGG CGCTGATGAA GGTCCCGACG
ATCTTCGTGT TTACGCACGA TTCGATCGGC CTCGGCGAAG ACGGCCCGAC GCACCAGTCG
ATCGAGCACG TGTCGAGCCT GCGCCTGATC CCGAACCTCG ACGTGTGGCG TCCGGCCGAC
ACGGTCGAGA CGGCCGTCGC ATGGACCCAC GCCGTGGCTG CCGACCGTCC GTCGAGCCTG
ATCTTCAGCC GCCAGAACCT CGCGTTCAAC CCGCGTACCG ATGCGCAGAT CGCGAACATC
GAGAAGGGCG GCTACGTGCT GAAGGACTGG GACGAAGAGA TCGTCGCGCG CAAGATCATC
CTGATCGCGA CGGGCTCGGA AGTCGAGCTC GCGATGAAGG CCGTCGAGCC CCTCGCGCAG
CAGGGCATCG CGGCCCGCGT CGTGTCGATG CCGTCGACCA ACGTGTTCGA TCGCCAGGAC
GCCGAATACC GCGAACGCGT GCTGCCGCAC GGCGTGCGCC GCGTCGCGAT CGAAGCGGGC
GTGACGAGCT TCTGGCACAA GTACGTCGGC CTCGAAGGCG GCGTCGTCGG GATCGACACG
TTCGGTGAAT CGGCACCGGC CGGCGTGCTG TTCAAGTACT TCGGCTTTAC CGTCGAGCAC
GTCGTCGAGA CCGCGAAGGC CGTGCTGGCC TGA
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| Protein sequence | MPPCPRFLDS FSGLDMTTSS PASTTLMANA IRALAMDAVQ QANSGHPGMP MGMAEIGVAL
WSRHLKHNPT NPHWADRDRF VLSNGHGSML LYSLLHLTGY DLPIEELKNF RQLHSKTPGH
PEYGITPGVE TTTGPLGQGL ANAVGMALGE ALMADEFNRD GAKIVDHHTY VFLGDGCLME
GISHEACSLA GTLKLNKLIA LYDDNGISID GDVVNWFHDD TPKRFEAYGW NVIPNVNGHD
VDAVDAAIAK AKLSDKPTLI CCKTVIGKGA ATKAGGHDVH GAALGAEEIA KTREALGWKW
EPFVIPQEVY AAWDAKEAGK RAETEWDATF AQYREKFPAQ AAEFERRMAN QLPADWAEKA
AAIIAGANER AETVATRKAS QQAIEGLAAV LPELLGGSAD LTGSNLTNWK ASKAVRANPE
GAGVLLGNHI NYGVREFGMS AALNGLALHG GHKPFGGTFL TFSDYSRNAL RVAALMKVPT
IFVFTHDSIG LGEDGPTHQS IEHVSSLRLI PNLDVWRPAD TVETAVAWTH AVAADRPSSL
IFSRQNLAFN PRTDAQIANI EKGGYVLKDW DEEIVARKII LIATGSEVEL AMKAVEPLAQ
QGIAARVVSM PSTNVFDRQD AEYRERVLPH GVRRVAIEAG VTSFWHKYVG LEGGVVGIDT
FGESAPAGVL FKYFGFTVEH VVETAKAVLA
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