| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0561 |
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| Symbol | |
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| ID | 6178631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 631471 |
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| End bp | 632328 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641680309 |
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| Product | spermidine synthase |
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| Protein accession | YP_001807274 |
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| Protein GI | 172059622 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.329575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACGA CTCTCCTCTT CCATCCCACC CCCGACGCCG CCTACGGCTT CCCCAACGCA
CGCCGGCTCG CGCACGTCGC GTCGCCGCAC CAGCGCATCG AAGTCTGGGA AACGCCGCAG
CTCGGCCGCC TGTTTACGCT GGACGGCCGG CCGATGACGT CGGTCGGCGA CGAATTCGTG
TATCACGAGT GCATGACCCA CCCGGCCGCG CTCGCGCATC CGTGCCCGAG GAAGGCGCTC
GTGCTCGGCG GCGGCGACGG CGGCGCCGCG CGCCAGTTGC TCAAGCACGC GTGCATCGAG
CGGGTCGTCG TCGCCGAGCT CGACGACGAA GTGGTCGGCA TGGCGCGCCG CTATCTCGAC
GACGTGCACC AGGGCGCACT CGACGACCCG CGCGTCGAGG TCGTGATCGG CGACGCCGCG
CATTTCGTCA CGTCGACCAT CGAGCATTTC GATCTCGTCG TGTTCGACCT CACGCCGCCC
GATTCGCCCG CGGCCGGCCT CTATACGCGC GAGTTCTACG CGCAGCTCAA GCGGATCCTC
ACACCGCGCG GGGCGATCTC GATGCACCTC GGCTCGCCGG TGTTCCACGC TGCGCGCATC
GCCGCGCTGC TCGACGACCT GCGCGCGAGC TTCGCGTTCG TCGATCCGCT GTCTGCTCAT
GTGCCGCTCT ACGGCTCCCA ATGGCTGATG GCGATCGCGA GCGATACGCT CGATGCGGCC
GCGCTGTTCG CGCACGACGT CGACGAACGC CTCGCCGCAC GCCGCGTGCA GGGATTGCGC
TACTACGATG CGCGACTTCA TGCGGCCCTC TTTGCCCTGC CGTGCGCGCT GCGCGATACA
CTGGGCGTTC GCCGCTGA
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| Protein sequence | MSTTLLFHPT PDAAYGFPNA RRLAHVASPH QRIEVWETPQ LGRLFTLDGR PMTSVGDEFV
YHECMTHPAA LAHPCPRKAL VLGGGDGGAA RQLLKHACIE RVVVAELDDE VVGMARRYLD
DVHQGALDDP RVEVVIGDAA HFVTSTIEHF DLVVFDLTPP DSPAAGLYTR EFYAQLKRIL
TPRGAISMHL GSPVFHAARI AALLDDLRAS FAFVDPLSAH VPLYGSQWLM AIASDTLDAA
ALFAHDVDER LAARRVQGLR YYDARLHAAL FALPCALRDT LGVRR
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