Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0559 |
Symbol | |
ID | 6177976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 630078 |
End bp | 630845 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641680307 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_001807272 |
Protein GI | 229597240 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.43555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGAAG CCACCACCAC CGCGGCCGTG CCGCGTTTCT TCGTCGAAGC GGCGCTGCGC GCCGATGCGA CGCTCACGCT GCCGGCCGAG GTCGCGCGTC ACGCGCAGGT GCTGCGGCTG CAGCCCGGCG ACACGCTCGC ACTGTTCGAC GGCAGCGGCG GCCAGTACCG CGCGCGGCTC GTCGAGATCG ACAAGCGCAA CGCGCTCGCG CAGATCGAGG CGTTCGACCC GGCCGAGGCC GAGCCGCCGT ATCGCGTGAC GCTCGCGCAG GGCATCGCCG GCGGCGACAA GATGGACTGG GTCATCGAGA AAGCCGTCGA GCTCGGCGTC GCGGCGGTCG TGCCGCTGTC GACCGCGCGC GGCGTCGTGA AACTGTCGGG GGAGCGCGCG GACAAGCGCG TCGCGCACTG GCGCGGCGTC GTGCGCGCGT CGTGCGAACA GTGCGGACGC AACCGCGTGC CCGACGTCGC GCCGGTACGC GGCTTCGGCG CGTGGCTCGA TACGCTGCCG GCCGCGCCGG CCGACGGCGA GCTGCGGCTG CTGCTGTCGC CGCGCGCGAG CGTCCCGTTC GCGTCGCTGC CCGACGCGCC GCCCGCGGCT GAAGTCACGC TGCTGATCGG GCCGGAAGGC GGTCTGTCGC CGGACGAAGA AAACGCGGCC CGCGCGCACG GGTTCACGGC GTTGTCGCTC GGGCCACGCG TGCTGCGCAC CGAGACGGCC GGCGCGGCCG TGCTCGCCGC GCTCGCGGCA CGCTGGGGCG GGTGGTAA
|
Protein sequence | MSEATTTAAV PRFFVEAALR ADATLTLPAE VARHAQVLRL QPGDTLALFD GSGGQYRARL VEIDKRNALA QIEAFDPAEA EPPYRVTLAQ GIAGGDKMDW VIEKAVELGV AAVVPLSTAR GVVKLSGERA DKRVAHWRGV VRASCEQCGR NRVPDVAPVR GFGAWLDTLP AAPADGELRL LLSPRASVPF ASLPDAPPAA EVTLLIGPEG GLSPDEENAA RAHGFTALSL GPRVLRTETA GAAVLAALAA RWGGW
|
| |