Gene BamMC406_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0558 
Symbol 
ID6178814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp629256 
End bp629819 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content64% 
IMG OID641680306 
Producthypothetical protein 
Protein accessionYP_001807271 
Protein GI172059619 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.567748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACT CCATCTACGC GCACGACACG GCGGGGGCGG AACTGTTCGC GGCCGGCGAC 
GGCAATCTGT TCCAGCGCGT GATGCAACTA CACGCGGTGG CGCAGGCTGG CGGCGCGTCG
GAGCAACAGG AAGCCGAGCC CGGGCTTTCA TCGAACGAGG AGCCTATGAG CCTTTTCACG
ACCGTGCGAC CCAACCTCGT GCAGTCGATC CGCGCGTTCC GCGTGCAGGA TCTCGCCGAC
GAAGCCAGCC GGCTCGGCCA GCATTTCCTG TACGCGTATT GCGGCGCAGC GCAGTCGAAG
CAGGAGGTGA TGGAGACGAT CGCGACGTCA TTCCTGTTTC CGAAGCATTT CGGGAAGAAC
TACGACGCGC TGTACGACTG CCTGACCGAC CTCGTCGCGA AGGCCGGCGC GCAGCCCGGT
TTCGTGATCG TCCTCGAAGG GCTGCCGATC GCGCAGAAAT TCGACAAGGA AGGGCGCGAG
ACGCTGCTCG ACGTGTTCCG CGAAGCCGCC GAGTTCTGGG CCGAGCGCAA GGTCGCGTTC
CGCGTGTTCT ATTCGTTCGC GTAA
 
Protein sequence
MSDSIYAHDT AGAELFAAGD GNLFQRVMQL HAVAQAGGAS EQQEAEPGLS SNEEPMSLFT 
TVRPNLVQSI RAFRVQDLAD EASRLGQHFL YAYCGAAQSK QEVMETIATS FLFPKHFGKN
YDALYDCLTD LVAKAGAQPG FVIVLEGLPI AQKFDKEGRE TLLDVFREAA EFWAERKVAF
RVFYSFA