Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0548 |
Symbol | araH |
ID | 6177873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 618395 |
End bp | 619411 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641680296 |
Product | L-arabinose transporter permease protein |
Protein accession | YP_001807261 |
Protein GI | 172059609 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0287231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.64831 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGTCC GGGAAAACCT CGCCAGCGCA GCCGTGAAGC CGTCGGCCGA CGCGCTGGTT CCACAGCAGA GCGACCGCCA GAAGTGGTGG CAGCACCTCA CCGAATACAG CCTGATCGCG ATCTTCGCGG TGATGTTCCT CACGATGTCG CTGACGGTCG ATCACTTCTT CTCGATCGAC AACATGCTCG GCCTCGCGCT GTCGATCTCG CAGATCGGGA TGGTCGCGTG CACGATGATG TTCTGTCTGG CCTCGCGCGA CTTCGACCTG TCGATCGGCT CGACCGTCGC GTTCTCCGGC GTGCTGTGCG CGATGGTGCT GAACGCGACC GACAACACGT TCGTCGCGAT CATCGCGGCG GTCGCCGCTG GTGCGGCGAT CGGGTTCGTG AACGGCGCGG TGATCGCGTA CCTGCGCATC AACGCGCTGA TCACGACGCT CGCGACGATG GAAATCGTGC GCGGGCTCGG CTTCATCGTG TCGAAGGGGC AGGCGGTCGG CGTGTCGTCG GACACCTTCA TCGCGCTCGG CGGGCTGTCG CTGTTCGGCG TATCGCTGCC GATCTGGGTC ACGCTGCTGT GCTTCATCGT GTTCGGCGTG CTGCTGAACC AGACCGTCTA CGGCCGCAAT ACGCTCGCGA TCGGCGGCAA CCCGGAGGCC TCGCGCCTCG CGGGGATCAA CGTCGAGCGC ACGCGCGTCT ACATCTTCCT GATCCAGGGC GCGGTCACGG CGCTCGCCGG GGTGATCCTC GCGTCGCGCA TCACGTCGGG CCAGCCGAAC GCCGCGCAGG GCTTCGAGCT GAACGTGATC TCCGCATGCG TGCTCGGCGG CGTGTCGCTG ATGGGCGGCC GCGCGACGAT CTCGGGCGTC GTGATCGGCG TGCTGATCAT GGGTACCGTC GAGAACGTGA TGAACCTGAT GAACATCGAC GCGTTCTACC AGTACCTGGT GCGCGGCGCG ATCCTGCTCG CGGCCGTGCT GCTCGACCAG CTGAAGAACC GCGGCGTACG CGACTGA
|
Protein sequence | MQVRENLASA AVKPSADALV PQQSDRQKWW QHLTEYSLIA IFAVMFLTMS LTVDHFFSID NMLGLALSIS QIGMVACTMM FCLASRDFDL SIGSTVAFSG VLCAMVLNAT DNTFVAIIAA VAAGAAIGFV NGAVIAYLRI NALITTLATM EIVRGLGFIV SKGQAVGVSS DTFIALGGLS LFGVSLPIWV TLLCFIVFGV LLNQTVYGRN TLAIGGNPEA SRLAGINVER TRVYIFLIQG AVTALAGVIL ASRITSGQPN AAQGFELNVI SACVLGGVSL MGGRATISGV VIGVLIMGTV ENVMNLMNID AFYQYLVRGA ILLAAVLLDQ LKNRGVRD
|
| |