Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0546 |
Symbol | |
ID | 6177809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 615729 |
End bp | 616724 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641680294 |
Product | monosaccharide-transporting ATPase |
Protein accession | YP_001807259 |
Protein GI | 172059607 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.059898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCA GAACATTCGT AACGCTGGCC GCCGCGGCGG CGGTGGTGAT GGGCAGTCCG GTCGCGCACG CGGCCGATCC GGTCAAGATC GGCTTTCTGG TGAAGCAGCC GGAAGAGCCG TGGTTCCAGG ACGAATGGAA ATTCGCCGAG ATGGCCGCGA AGGACAAGGG CTTCACGCTC GTGAAGATCG GCGCGCCGTC GGGCGAGAAG GTGATGAGCG CGATCGACAA CCTGTCCGCG CAGAAGGTGC AGGGCTTCAT CATCTGCACG CCCGACGTGA AGCTCGGGCC GGGCATCGTC GCGAAGGCGA AGTCGCACAA CCTGAAGATG ATGACGGTCG ACGACCGCCT CGTCGACGGC GCGGGCAAGC CGATCGAGTC GGTGCCGCAC ATGGGCATTT CCGCGTACAA CATCGGCAAG CAGGTCGGCG ACGGCATCGC GGCCGAGATC AAGAAGCGCG GCTGGAACAT GAAGGAAGTC GGCGCGATCG ACATCACGTA CGAGCAGCTG CCGACCGCGC ACGACCGCAC GAGCGGCGCG ACCGACGCGC TGGTGGCGGC CGGCTTCCCG AAGGCGAACG TGATCGCGGC GCCGCAGGCG AAGACCGACA CCGAGAACGC GTTCAACGCG GCGAACATCG CGCTCACCAA GAACCCGCAG TTCAAGCACT GGGTCGCCTA CGGCCTGAAC GACGAAGCCG TGCTCGGCGC GGTGCGCGCG GCCGAAGGGC GCGGCTTCAA GGCGGACAAC ATGATCGGCA TCGGCATCGG CGGTTCCGAT TCGGCGCTCA GCGAATTCAA GAAGCCGCAG CCGACGGGCT TCTACGGCAC CGTGATCATC AGCCCGAAGC GCCACGGCGA GGAAACCTCG GACCTGATGT ACGCGTGGAT TACGCAGGGC AAGGCGCCGC CGGCGCTGAC GCTGACGACG GGCATGCTCG CGACGCGCGA CAACGTGTCG AAGGTGCGCG ACGAGATGGG GCTCGCATCG AAGTAA
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Protein sequence | MKRRTFVTLA AAAAVVMGSP VAHAADPVKI GFLVKQPEEP WFQDEWKFAE MAAKDKGFTL VKIGAPSGEK VMSAIDNLSA QKVQGFIICT PDVKLGPGIV AKAKSHNLKM MTVDDRLVDG AGKPIESVPH MGISAYNIGK QVGDGIAAEI KKRGWNMKEV GAIDITYEQL PTAHDRTSGA TDALVAAGFP KANVIAAPQA KTDTENAFNA ANIALTKNPQ FKHWVAYGLN DEAVLGAVRA AEGRGFKADN MIGIGIGGSD SALSEFKKPQ PTGFYGTVII SPKRHGEETS DLMYAWITQG KAPPALTLTT GMLATRDNVS KVRDEMGLAS K
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