Gene BamMC406_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0539 
SymbolmtgA 
ID6177318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp608618 
End bp609355 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content67% 
IMG OID641680287 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_001807252 
Protein GI172059600 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.593842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGCGG TAAGCGGCAC GCGGCGCACA CGCGCGGTCA GCCCGACCCG CTGGATCGTC 
TATGCGGGTT CGGTGTTCGC GGGTGCGTGG CTCGCGACGC AGCTGTTCTA TCTCGTGCAG
ATCGCGCTGT GGTCGTTCAT CAATCCCGGT TCGACCGCGT TCATGCGTAC CGACGCATGG
TGGCTGTCGC GCGACAAGCC GCCCGCGCAG GTCCAGCACC AGTGGGTGCC GTACGACCAG
ATCTCGCGCA ACCTGAAGCG CGCGCTGATC GCGTCGGAGG ATTCGACCTT CGCGACCAAC
AACGGCTACG ACGTCGACGC GATCCTGCAG GCGTGGGAGA AGAACAAGGC GCGCGGCCGG
ATCGTCGCGG GCGGCTCGAC GATCACGCAG CAGCTCGCGC GCAACCTGTT CCTGTCGCGC
GAGAAAAGCT ACATCCGCAA AGGGCAGGAG CTGATCATCA CGTGGATGCT CGAGACGGTG
CTCGACAAGG AGCGGATCTT CGAGATCTAC CTGAATTCGG TCGAATGGGG CCGCGGCGTG
TACGGCGCCG AGGCTGCCGC ACGCTATTAC TACCGAATTC CCGCGAGCCG GCTCGGCGCG
TGGCAATCGG CGCGCCTCGC GGTGATGCTG CCGAAGCCGC GCTGGTTCGA CGCGCACCGC
GGCTCGGCCT ACCAGGCGCA GCGCGCGGCC GTCATTGCCC GCCGGATGGG CGCGGCCGAG
CTTCCGCAAT CGCAGTGA
 
Protein sequence
MAAVSGTRRT RAVSPTRWIV YAGSVFAGAW LATQLFYLVQ IALWSFINPG STAFMRTDAW 
WLSRDKPPAQ VQHQWVPYDQ ISRNLKRALI ASEDSTFATN NGYDVDAILQ AWEKNKARGR
IVAGGSTITQ QLARNLFLSR EKSYIRKGQE LIITWMLETV LDKERIFEIY LNSVEWGRGV
YGAEAAARYY YRIPASRLGA WQSARLAVML PKPRWFDAHR GSAYQAQRAA VIARRMGAAE
LPQSQ