| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0538 |
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| Symbol | aroE |
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| ID | 6179110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 607737 |
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| End bp | 608603 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641680286 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001807251 |
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| Protein GI | 172059599 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.617722 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGA TCGCGCCGAC GAGCGGCGCC GACCGCTACG TTGTGTTCGG CAACCCGGTG
GCGCACAGCA AGTCGCCGTT CATCCACGCG CAGTTCGCCG CGCAGACGGG CGAGGCGATC
ACTTACGAGC ACCGGCTCGC GCCGGTCGAC GGCTTCGAGG CCGCCGTGCG CGCGTTCGTC
GCCGAAGGCG GGCGCGGCGC GAACGTCACC GTGCCGTTCA AGCTCGACGC GCATGCGCTC
GCCGACACGC TGTCGCCGCG CGCGGCGGCG GCCGGCGCGG TAAACACGCT GCGTTTCGAC
GCCGACGGCC GCATCCACGG CGACAACACC GACGGTGTCG GCCTCGTGCG CGACATCGAA
TCGAATCTCG GCGTGTCGCT CGCAGGCGCG CGCATCCTGC TGCTCGGCGC GGGCGGCGCC
GCCCGCGGTG TCGTGCTGCC GATGCTCGAG CGCGCGCCGC TGTCGATCAC GATCGTGAAC
CGCACCGCAA GCAAGGCCGA GACGCTCGTC GGCCAGTTCG CGCAGGCCGC GCACGATGCG
GGCTGCGTGC TGGCGGGCGG TGGCCCGGAC ACCGTCCGTG CCGAACCGTA CGACGTGATC
GTCAACGCGA CGGCCGGCAG TCTCGATGCG GCGCTGCCGG AGTGCGACGA TGCCGCGTTC
GGCGCGGGCA CGCTGGCCTA CGACATGATG TACGGCGCGC AGCCGACCGT GTTCATGCAG
CATGCGGCGT CGCTCGGCGC GCGCACGGCC GACGGTCTCG GCATGCTGGT CGAGCAGGCG
GCCGAATCGT TCTTCATCTG GCGCGGCGTG CGGCCGGACG GCGCACCCGT GCTGGCCGCG
CTGCGCCAGG CGCTCGCGGC GGCCTGA
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| Protein sequence | MTAIAPTSGA DRYVVFGNPV AHSKSPFIHA QFAAQTGEAI TYEHRLAPVD GFEAAVRAFV
AEGGRGANVT VPFKLDAHAL ADTLSPRAAA AGAVNTLRFD ADGRIHGDNT DGVGLVRDIE
SNLGVSLAGA RILLLGAGGA ARGVVLPMLE RAPLSITIVN RTASKAETLV GQFAQAAHDA
GCVLAGGGPD TVRAEPYDVI VNATAGSLDA ALPECDDAAF GAGTLAYDMM YGAQPTVFMQ
HAASLGARTA DGLGMLVEQA AESFFIWRGV RPDGAPVLAA LRQALAAA
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