| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0537 |
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| Symbol | |
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| ID | 6177050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 605650 |
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| End bp | 607740 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641680285 |
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| Product | ribonuclease II |
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| Protein accession | YP_001807250 |
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| Protein GI | 172059598 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.731192 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGTTT TCTTCGAGGA ATCGGGCAGT TTCAAGGCGG GCAGCGTGCT GTCGCGCCAG
GGCGACGCGT TTCAGGTCGA GTTGCCCGGC GGGCGGCGGG CGAAGGTGCG CGCGAAAGAC
GTGCTGATCG AATTCGAGAA GCCGGCCGCG AGCGAACTGA TGCAGGAAGC CGACACGGCC
GCGCAGCAGA TCGACCTGGA TTTCCTGTGG GAATGCGCGC CGGCGGAGGA ATTCACCTAC
ACGGCGCTGG CCGCTGAATA CTTCGGCGCG ACCTACGGCG CGGTCGAGCG CGCGGCGCTG
GTGCTGCGGC TGCACGGCTC GCCCGTCTAC TTCCGCCGCA AGGGGCGCGG CCAGTACCAG
CGCGCGCCGG AAGACCAGCT CAAGATGGCG CTCGCGTCGC TCGAGCGCAA GCGCCAGCAG
GCGCTCGTCC AGGTCCAGTA TGAAGAGGAG CTGAAGGCCG GCAAGCTGCC GGAGGCGTTC
GCGGGCAAGG TGCTCGGGCT GCTGACGCGG CCGGACAAGA ATTCGATCGA ATACAAGGCG
CTCGAGGCGG CGGCCGGCGC GCGCGGCGTG TCGCCGGCGC GGCTGATGCT CGACTGCGGC
GGCGTCGCGT CGGCGCGTGC GCTGCACGAG GCGCGCTTCC TCGCGGAATT CTTCCCGCAC
GGCACGGGCT TTCCGCCCGT CACGGTCGGC CCGCTGCCGG ACGATCTGCC GCGCGCGGAC
GTCGAGGCGT TCTCGATCGA CGACGTCACG ACGACCGAAA TCGACGACGC GTTCTCGGTC
GAGCACCTGG CCGACGGTCG CGTGCGGATC GGCGTGCACA TCGCGGCGCC GGCGCTCGGC
ATCGTGCGCG GCGACGCGGT CGATGCGATC GCGCGTACGC GCCTGTCGAC CGTCTATATG
CCGGGCGACA AGATCACGAT GCTGCCGGAC GACGTCGTCG ACGTGTTCAC GCTGAAGGAA
GGCGACTACC GCCCGGCGCT GTCGCTGTAC ATCATCGTCA ACCGCGAGAC GCAGGACATC
GTCGCGAACG AGACGCGCGC CGAACTCGTG TTCGTGAAGA GCAACCTGCG CCACAACACG
CTCGACGAGC TCGTCAACGA AGAGACGCTC GCGGCCGGCA CCGGCGACTA CCCGCACAAG
GACGACATCG CCGTGCTGTG GCCGCTCGCG CAGGCACTGT TCGAGAAGCG CCAGGTCGCG
CGCGCGGGCT ATGGCCTGAA GCGCGAGGTG CAGCGCAACA CCGACTACAA CTTCTACGTC
GAAGGCGAGC ACGTGACGAT CACGCCGCGT CGCCGCGGGT CGCCGCTCGA CCTGATCGTG
TCGGAGCTCG CGATCCTCGC GAACTCGACG TGGGGCGCGT TCCTGCACGA TCACACGGTG
CCGGGCATCT ACCGCTCGCA GCGCGGCTTC GGCGCACCGG GCCCGAAGCG CACGCGGATG
CAGACGACGG CCGCGCCGCA CGAAGGCCTC GGCGTCGCGC AGTACGCGTG GAGCACGTCG
CCGCTGCGCC GCTACGTCGA CCTCGTGAAC CAGTGGCAGC TGCTCGCGTG CGTGCAGCAC
GGCGTCACCG CGAAGCTCGC CGCGCCGTTC AAGCCGAAGG ACGCCGACCT GTACGCGGTC
GTGCAGGGCT TCGACGACAC CTATACCGCG TACGCCGACT ACCAGCGCCG GATGGAATAC
TTCTGGTGCC TGCGCTGGCT TGCGCAGGAG CAGAAGAAGC AGGTTGTCGC GAGCGTCGTG
AAGGGCGATC TCGTGCGTCT CGAGGAAATT CCGCTGCTGC TGCACGTGCC GGGGCTCGGC
GTGCATGCGC GCGGCACGCG CGTGCTGCTC GACGTGATGT CGCTCGACGA ACTGACGATC
GAGGCGTCGG TGCGACTGCT GAACGTGCTC GACGCGCCGA CCGTGACGAG CGGCGAGGCG
GCCGACGACG AAGACGAAAC CGACGGCGGC GACGACACGC TGGTCGATGC GGAAGACGCG
TCGGCGCAAA CCGAGGCCGA AGCGCTGGCC GAATCGGACG GCGCGGTGGC CGAAGGCGGC
GATGCCGCGA CCGGCAACGG CCAGGCAAGC GAAGAGGGGC GCGCATCATG A
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| Protein sequence | MNVFFEESGS FKAGSVLSRQ GDAFQVELPG GRRAKVRAKD VLIEFEKPAA SELMQEADTA
AQQIDLDFLW ECAPAEEFTY TALAAEYFGA TYGAVERAAL VLRLHGSPVY FRRKGRGQYQ
RAPEDQLKMA LASLERKRQQ ALVQVQYEEE LKAGKLPEAF AGKVLGLLTR PDKNSIEYKA
LEAAAGARGV SPARLMLDCG GVASARALHE ARFLAEFFPH GTGFPPVTVG PLPDDLPRAD
VEAFSIDDVT TTEIDDAFSV EHLADGRVRI GVHIAAPALG IVRGDAVDAI ARTRLSTVYM
PGDKITMLPD DVVDVFTLKE GDYRPALSLY IIVNRETQDI VANETRAELV FVKSNLRHNT
LDELVNEETL AAGTGDYPHK DDIAVLWPLA QALFEKRQVA RAGYGLKREV QRNTDYNFYV
EGEHVTITPR RRGSPLDLIV SELAILANST WGAFLHDHTV PGIYRSQRGF GAPGPKRTRM
QTTAAPHEGL GVAQYAWSTS PLRRYVDLVN QWQLLACVQH GVTAKLAAPF KPKDADLYAV
VQGFDDTYTA YADYQRRMEY FWCLRWLAQE QKKQVVASVV KGDLVRLEEI PLLLHVPGLG
VHARGTRVLL DVMSLDELTI EASVRLLNVL DAPTVTSGEA ADDEDETDGG DDTLVDAEDA
SAQTEAEALA ESDGAVAEGG DAATGNGQAS EEGRAS
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