Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0535 |
Symbol | |
ID | 6178099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 603617 |
End bp | 605002 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641680283 |
Product | UDP-N-acetylmuramate |
Protein accession | YP_001807248 |
Protein GI | 172059596 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATCC ACATTCTTGG CATCTGCGGC ACCTTCATGG GCGGTCTTGC CGTGCTCGCG CGCGAGGCGG GCCACACGGT GACGGGTTGC GACGCGGGCG TCTATCCGCC GATGAGCACG CAGCTCGAGG CGCAGGGCAT CACGCTGATC GAGGGCTACG GCGCCGAACA GATCGACCTG AAACCCGACC TGTTCGTGAT CGGCAACGTC GTCACGCGCG GCAACCCGCT GATGGAGGCG ATCCTCGATC GCGGCCTGCC TTACGTATCC GGCCCGCAAT GGCTCGGCGA GCACGTGCTG GCCGGCAAGT GGGTGCTGGC GGTCGCGGGC ACGCACGGCA AGACGACCAC GTCGTCGATG CTCGCGTGGC TGCTGGAAGA TGCCGGCCTG AACCCGGGCT TCCTGATCGG CGGCGTGCCG CTGAATTTCG GCGTGTCGGC GCGGCTGACC GATTCGAGCT TCTTCGTGAT CGAGGCCGAC GAATACGATA CGGCGTTCTT CGACAAGCGC TCGAAGTTCG TCCACTACCG GCCGCGCACC GCGGTGCTCA ACAATCTCGA ATTCGATCAC GCGGACATCT TCCCGGATCT CGCCGCGATC GAAACGCAAT TCCATCATCT CGTACGCACG GTGCCGGGTG TCGGCCGGCT CGTGACCAAC GGCCGTTCCG ACGCGCTGGA GCGCGTGCTC GCGCGCGGCT GCTGGAGCGA GGTCGAGCGC TTTGGCGTCG ACGGCGGCTG GCAGGCGCTG CCGGCCGAGG ACGGCGTGCC GGTCGACGAA CGGTTCGCGG TGTATTCGCA GTCGGAGCGC GTCGGTGAAG TCGCGTGGCA GGTGCAGGGC GACCACAACC GGATGAACGC GCTCGCGGCG ATCGCCGCCG CGCGCCACGT CGGCGTGCCG CCCGCCCAGG CCGCCGAATC ACTCGCATCG TTTCGCAACG TGAAGCGGCG CATGGAAGTG CGCGGCAGCA TCGACGGCGT GACCGTGTAC GACGACTTCG CGCACCATCC GACCGCGATC GAAACCACGA TCGCCGGCCT TCGTGCGCGC ATCGGCCGCC AAAATTCCCG CATTCTCGCG GTGCTCGAGC CGCGCTCGAA CACGATGAAG CTGGGCGTGA TGAAGGCGCA ACTGCCGGCC AGCCTCGCGG ACGCCGATCT GGTGTTCGGC TATGGCGCGC CTGCCGGGCG CGACGTGCTG GGCTGGAACC TGGCCGACGC GCTCGCGCCG CTCGGCGACA AGGCGCGTGC GTTCGACGAT CTCCATCTGC TGGTGAAGTC GGTCGTGGAG GCCGCGCGCC CGGGCGACCA CGTGCTGGTG ATGAGCAACG GCGGCTTCGG CGGCGTGCAC CAGAAGCTGC TCGACGCGCT CGGGAGCCGC GCGTGA
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Protein sequence | MHIHILGICG TFMGGLAVLA REAGHTVTGC DAGVYPPMST QLEAQGITLI EGYGAEQIDL KPDLFVIGNV VTRGNPLMEA ILDRGLPYVS GPQWLGEHVL AGKWVLAVAG THGKTTTSSM LAWLLEDAGL NPGFLIGGVP LNFGVSARLT DSSFFVIEAD EYDTAFFDKR SKFVHYRPRT AVLNNLEFDH ADIFPDLAAI ETQFHHLVRT VPGVGRLVTN GRSDALERVL ARGCWSEVER FGVDGGWQAL PAEDGVPVDE RFAVYSQSER VGEVAWQVQG DHNRMNALAA IAAARHVGVP PAQAAESLAS FRNVKRRMEV RGSIDGVTVY DDFAHHPTAI ETTIAGLRAR IGRQNSRILA VLEPRSNTMK LGVMKAQLPA SLADADLVFG YGAPAGRDVL GWNLADALAP LGDKARAFDD LHLLVKSVVE AARPGDHVLV MSNGGFGGVH QKLLDALGSR A
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