Gene BamMC406_0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0535 
Symbol 
ID6178099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp603617 
End bp605002 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content68% 
IMG OID641680283 
ProductUDP-N-acetylmuramate 
Protein accessionYP_001807248 
Protein GI172059596 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATCC ACATTCTTGG CATCTGCGGC ACCTTCATGG GCGGTCTTGC CGTGCTCGCG 
CGCGAGGCGG GCCACACGGT GACGGGTTGC GACGCGGGCG TCTATCCGCC GATGAGCACG
CAGCTCGAGG CGCAGGGCAT CACGCTGATC GAGGGCTACG GCGCCGAACA GATCGACCTG
AAACCCGACC TGTTCGTGAT CGGCAACGTC GTCACGCGCG GCAACCCGCT GATGGAGGCG
ATCCTCGATC GCGGCCTGCC TTACGTATCC GGCCCGCAAT GGCTCGGCGA GCACGTGCTG
GCCGGCAAGT GGGTGCTGGC GGTCGCGGGC ACGCACGGCA AGACGACCAC GTCGTCGATG
CTCGCGTGGC TGCTGGAAGA TGCCGGCCTG AACCCGGGCT TCCTGATCGG CGGCGTGCCG
CTGAATTTCG GCGTGTCGGC GCGGCTGACC GATTCGAGCT TCTTCGTGAT CGAGGCCGAC
GAATACGATA CGGCGTTCTT CGACAAGCGC TCGAAGTTCG TCCACTACCG GCCGCGCACC
GCGGTGCTCA ACAATCTCGA ATTCGATCAC GCGGACATCT TCCCGGATCT CGCCGCGATC
GAAACGCAAT TCCATCATCT CGTACGCACG GTGCCGGGTG TCGGCCGGCT CGTGACCAAC
GGCCGTTCCG ACGCGCTGGA GCGCGTGCTC GCGCGCGGCT GCTGGAGCGA GGTCGAGCGC
TTTGGCGTCG ACGGCGGCTG GCAGGCGCTG CCGGCCGAGG ACGGCGTGCC GGTCGACGAA
CGGTTCGCGG TGTATTCGCA GTCGGAGCGC GTCGGTGAAG TCGCGTGGCA GGTGCAGGGC
GACCACAACC GGATGAACGC GCTCGCGGCG ATCGCCGCCG CGCGCCACGT CGGCGTGCCG
CCCGCCCAGG CCGCCGAATC ACTCGCATCG TTTCGCAACG TGAAGCGGCG CATGGAAGTG
CGCGGCAGCA TCGACGGCGT GACCGTGTAC GACGACTTCG CGCACCATCC GACCGCGATC
GAAACCACGA TCGCCGGCCT TCGTGCGCGC ATCGGCCGCC AAAATTCCCG CATTCTCGCG
GTGCTCGAGC CGCGCTCGAA CACGATGAAG CTGGGCGTGA TGAAGGCGCA ACTGCCGGCC
AGCCTCGCGG ACGCCGATCT GGTGTTCGGC TATGGCGCGC CTGCCGGGCG CGACGTGCTG
GGCTGGAACC TGGCCGACGC GCTCGCGCCG CTCGGCGACA AGGCGCGTGC GTTCGACGAT
CTCCATCTGC TGGTGAAGTC GGTCGTGGAG GCCGCGCGCC CGGGCGACCA CGTGCTGGTG
ATGAGCAACG GCGGCTTCGG CGGCGTGCAC CAGAAGCTGC TCGACGCGCT CGGGAGCCGC
GCGTGA
 
Protein sequence
MHIHILGICG TFMGGLAVLA REAGHTVTGC DAGVYPPMST QLEAQGITLI EGYGAEQIDL 
KPDLFVIGNV VTRGNPLMEA ILDRGLPYVS GPQWLGEHVL AGKWVLAVAG THGKTTTSSM
LAWLLEDAGL NPGFLIGGVP LNFGVSARLT DSSFFVIEAD EYDTAFFDKR SKFVHYRPRT
AVLNNLEFDH ADIFPDLAAI ETQFHHLVRT VPGVGRLVTN GRSDALERVL ARGCWSEVER
FGVDGGWQAL PAEDGVPVDE RFAVYSQSER VGEVAWQVQG DHNRMNALAA IAAARHVGVP
PAQAAESLAS FRNVKRRMEV RGSIDGVTVY DDFAHHPTAI ETTIAGLRAR IGRQNSRILA
VLEPRSNTMK LGVMKAQLPA SLADADLVFG YGAPAGRDVL GWNLADALAP LGDKARAFDD
LHLLVKSVVE AARPGDHVLV MSNGGFGGVH QKLLDALGSR A