Gene BamMC406_0525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0525 
Symbol 
ID6177872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp595089 
End bp595562 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content72% 
IMG OID641680273 
Product17 kDa surface antigen 
Protein accessionYP_001807238 
Protein GI172059586 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.308041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACCA AAAAAACCCT CACGCTCGCG GCCATGCTGA CCGCCACGCT GACGCTCGCC 
GGCTGCTTCA CGGCGCCGGG CTCGGCGGAT GTCTATAGCG TCGGCCAGGC GCAGCGCGAG
CAGACCGTCC GCATGGGCAC GGTCGAAAGC GTCCGCGCGG TGCGCATCCA GTCCGACGGC
GGCGGCAGCG CGATCGGCAC GCTCGGCGGC GGCGCGCTCG GCGCGGTCGC GGGCAGCGCG
ATCGGCGGCG GCAAGGGGTC GATCCTGACG GCCATCGCGG GCGGCCTCGT CGGCGCGGTC
GCGGGCAACG CGGTCGGCGA AAACCTCGGC ACGGCGAACG GTGTCGAAAT CACCGTGCGC
CTCGATAACG GCGACCTGCG CTCGATCACG CAGGCGGCAA GCGGCGAAAT GTTCCGCGCC
GGCGAGCGTG TGCGACTGCT GTCGAGCGGC GGCGTCACGC GCGTCACGCA CTAA
 
Protein sequence
MLTKKTLTLA AMLTATLTLA GCFTAPGSAD VYSVGQAQRE QTVRMGTVES VRAVRIQSDG 
GGSAIGTLGG GALGAVAGSA IGGGKGSILT AIAGGLVGAV AGNAVGENLG TANGVEITVR
LDNGDLRSIT QAASGEMFRA GERVRLLSSG GVTRVTH